Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1992 GTGTATGCGGAAGTGTTGTCGCTGGTTGAGTTATGCAAAGTTAAACTAAAAGTTGTGCAGCTGAATAGCAACATGCTAGCCAATGACTTGCGGGCAGCATTGGCTGGACCTCCTGATATTTTGATCTCCACTCCTACTTGTGTAGCGAAGTGTTTGTCCGGTGGCATACTTAAGGCGGAATCCATTAGCGAATCACTTGAAACTCTTGTTCTTGATGAGGCAGATCTTCTACTGTCATATGGGTATGAAAAGGATATAAAAGCTTTTACACCTCATGTTCCCAGAAGTTGCCAGTGTCTTCTTATGTCTGCAACATCAAGTGCAGATGTTGACAAACTAAAGAAGTTGATTCTGCACAACCCATTTATTTTGACTTTGCCTGAAGTGGGAAATAACAAGGAAGAGATCATTCCTAAAAATGTTCAGCAGTTCTGGATTTCATGTTCTGCCAGTGATAAGTTACTTTACATCCTTGCTGTGTTGAAGTTGGGGTTGGTCCAAAAGAAAGTTCTGATATTCACTAATACCATAGACATGAGTTTCAGATTGAAACTATTCTTGGAAAAGTTTGGGATCAGATCTGCTGTTTTAAATCCTGAGTTGCCTCAGAATTCCCGTCTCCATATTCTGGAGGAATTCAATGCGGGCCTGTTTGATTATCTAATTGCAACAGATCTTAGTCAGTCAAAGGAAAAAGATGAACTGTCTAAGGAAAGTAATGCTGTATCACGGAAGTCTAGAAAACGTGCTAAATTAGATTCTGAATTCGGAGTTGTAAGGGGAATTGACTTTAAAAATGTATTCACGGTTATAAACTTTGAAATGCCTCATAGTGTTGAGGGATATGTACATCGAATTGGACGTACAGGTAGAGCGTACAATTCTGGTGCTTCTGTCTCTCTGGTTTCTCCAGATGAGATGTATACTTTAGAAGAAATAAGATCTTTTGTTGGGGATGATGAAAACAAAGGCACAAGTTCTATTGCTGAGTTTCCCCTCCTCACCAAGAATGCTGTTGAATCTTTACGGTATAGGACAGAGGATGTTGCCAAGAGTGTAACTAGAATTGCCGTCCGAGAGTCACGAGCCCAAGATTTGAGGAATGAAATTTTGAACTCTGAAAAGTTGAAAGCCCATTTTGAGACTAATCCAAGAGACCTAGATCTACTGAAGCATGACAAAATTTTGAGCAAGAATGCCCCACCTCCGCACCTACGTGATGTGCCTGACTACCTATTAGACAAACCAACGAAAGAGGCAAGGGAAATGGTTAAACTTGCAAGGGATGCAATGGGAAATAATAATAATCGCCGCAAAGGACCCAAGAGAAAATTAAAAAAAGATGGAGACCCTTTGAAGGCTTTGGCATCAAAAAGACTGCACAAAGTTAGGAAGACTGGTGGAAGCGATGGCAACAATAGCAGTGATAGACATAAACGCAAAAAGAATAAGGGTATTTAA 1461 0.4031 VYAEVLSLVELCKVKLKVVQLNSNMLANDLRAALAGPPDILISTPTCVAKCLSGGILKAESISESLETLVLDEADLLLSYGYEKDIKAFTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFILTLPEVGNNKEEIIPKNVQQFWISCSASDKLLYILAVLKLGLVQKKVLIFTNTIDMSFRLKLFLEKFGIRSAVLNPELPQNSRLHILEEFNAGLFDYLIATDLSQSKEKDELSKESNAVSRKSRKRAKLDSEFGVVRGIDFKNVFTVINFEMPHSVEGYVHRIGRTGRAYNSGASVSLVSPDEMYTLEEIRSFVGDDENKGTSSIAEFPLLTKNAVESLRYRTEDVAKSVTRIAVRESRAQDLRNEILNSEKLKAHFETNPRDLDLLKHDKILSKNAPPPHLRDVPDYLLDKPTKEAREMVKLARDAMGNNNNRRKGPKRKLKKDGDPLKALASKRLHKVRKTGGSDGNNSSDRHKRKKNKGI* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1992 486 CDD SF2_C_DEAD 141 302 - -
Pvu7g1992 486 Gene3D - 1 129 IPR027417 -
Pvu7g1992 486 Coils Coil 363 383 - -
Pvu7g1992 486 Gene3D - 130 332 IPR027417 -
Pvu7g1992 486 PANTHER ATP-DEPENDENT RNA HELICASE DDX56-RELATED 20 434 - -
Pvu7g1992 486 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 159 339 IPR001650 -
Pvu7g1992 486 SMART helicmild6 181 293 IPR001650 -
Pvu7g1992 486 MobiDBLite consensus disorder prediction 427 486 - -
Pvu7g1992 486 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 124 IPR014001 -
Pvu7g1992 486 Pfam Helicase conserved C-terminal domain 152 293 IPR001650 -
Pvu7g1992 486 PANTHER RNA HELICASE 20 434 - -
Pvu7g1992 486 MobiDBLite consensus disorder prediction 445 477 - -
Pvu7g1992 486 Pfam DEAD/DEAH box helicase 14 113 IPR011545 GO:0003676|GO:0005524
Pvu7g1992 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 318 IPR027417 -
Pvu7g1992 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 125 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1992 Pvu-Chr7 43163886 43170684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1992 21 333 Eukaryotic Initiation Factors Gene Family AT3G19760 23.323 4.81e-19 87.4