Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1991 ATGGCGGAAACCAAGTTGAAAGAAAGCATTGAGTTCGGTGTGAACGCTCGTCTCCTTTGCGCCTTACACAAGAAAGGGATTGCGAAACCCACTCCAATTCAGGGCGTCGCCATTCCACTCATTCTGGAAGGCAAGGACGTGGTTGCACGCGCCAAAACAGGTTTTGGAAAGACCTTAACATATCTTCTCCCGTTGCTTCAGAAACTTTTTACCGTTAGTGCTGATCGGAAAAAGTTGGCGCCCAATGCTTTTGTTCTTGTCCCTACTCACGCACTAAGTCAACAG 285 0.4807 MAETKLKESIEFGVNARLLCALHKKGIAKPTPIQGVAIPLILEGKDVVARAKTGFGKTLTYLLPLLQKLFTVSADRKKLAPNAFVLVPTHALSQQ 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1991 95 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 7 35 IPR014014 GO:0003724
Pvu7g1991 95 Gene3D - 2 95 IPR027417 -
Pvu7g1991 95 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 95 IPR027417 -
Pvu7g1991 95 PANTHER ATP-DEPENDENT RNA HELICASE DDX54 12 95 IPR033517 -
Pvu7g1991 95 Pfam DEAD/DEAH box helicase 31 95 IPR011545 GO:0003676|GO:0005524
Pvu7g1991 95 PANTHER RNA HELICASE 12 95 - -
Pvu7g1991 95 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 38 95 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1991 Pvu-Chr7 43159991 43160388 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1991 11 95 Eukaryotic Initiation Factors Gene Family AT3G19760 34.118 2.72e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1991 K14810 - pvu:PHAVU_007G1935001 180.644