Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1990 ATGGAGGGAGGAAGATCATCGGTTTCAAATGTTGAGGTTCGGTATAGAGGGATTCGGAGAAGGCCATGGGGTAAGTTTGCTGCAGAGATTCGTGACCCTACAAGGAAAGGGACTCGGATATGGCTTGGAACCTTCGACACTGCAGAACAAGCTGCACGAGCTTATGATGCTGCTGCTTTTCATTTTCGTGGCCACAGAGCCATTCTTAACTTCCCAAATGAGTACCAGTCTCCTGATCCAAACTCTTCTTTGCCTATGCCTTTAACAGTTCCTCCTTCTTCCTCTTCCTCCTCCTCTTCTTCTTCTTCCTATTCTTCTTACTGTATGGATAACCTTGCGGGACCTGAAATGATGCAAGGTGATGATGATATTTTTGAGTTGGAGTTCTTGGACAATAAGGTGCTTGAAGAACTCCTTCAGGAAAACAGACATCTCTTCAAGTGA 444 0.4527 MEGGRSSVSNVEVRYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQAARAYDAAAFHFRGHRAILNFPNEYQSPDPNSSLPMPLTVPPSSSSSSSSSSSYSSYCMDNLAGPEMMQGDDDIFELEFLDNKVLEELLQENRHLFK* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1990 147 MobiDBLite consensus disorder prediction 74 106 - -
Pvu7g1990 147 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Pvu7g1990 147 PRINTS Ethylene responsive element binding protein signature 38 54 IPR001471 GO:0003700|GO:0006355
Pvu7g1990 147 PANTHER DNA-BINDING DOMAIN 11 140 IPR044808 GO:0003700|GO:0009873
Pvu7g1990 147 Gene3D AP2/ERF domain 13 73 IPR036955 GO:0003700|GO:0006355
Pvu7g1990 147 ProSiteProfiles AP2/ERF domain profile. 14 72 IPR001471 GO:0003700|GO:0006355
Pvu7g1990 147 MobiDBLite consensus disorder prediction 71 106 - -
Pvu7g1990 147 CDD AP2 14 73 IPR001471 GO:0003700|GO:0006355
Pvu7g1990 147 SUPERFAMILY DNA-binding domain 14 73 IPR016177 GO:0003677
Pvu7g1990 147 SMART rav1_2 14 78 IPR001471 GO:0003700|GO:0006355
Pvu7g1990 147 Pfam AP2 domain 14 65 IPR001471 GO:0003700|GO:0006355
Pvu7g1990 147 PANTHER - 11 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1990 Pvu-Chr7 43136157 43136600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1990 12 139 AP2-EREBP Transcription Factor Family AT3G23230 57.812 1.04e-40 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pvu7g1990 AP2 9.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1990 - - gsj:114381985 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1663 1 42010504 42011278 Pvu7g1990 7 43136157 43136600 PCT