Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1977 ATGCATATAGGTCAGACAGATACAACTTCTGTGAAATGTCTGATCAACAGCATTTCTCGATTCATTCACCTGGTTTCATGTCAAACAATGAAACCTGTGACCTTTCAGAAGATCTGTAATAATATGGTTGGGGTGTTAAAGCGTTTGAAGCCGGTGCTTGATGACGTTATGGATCACTTAATCCCATCAGATGTCAATCTATGTAAAGAGTGTGAGGAATTGGATAAGCGAGTTAATGAAGCCAGAGACTTCATTGAAAAATGGAGTCCAAAGACGAGCAGGATTCACAGTGTTCTACAAGGTGGTACATTGTTGATCAAGTTACAGAGCACTTCTCTAGATATCTGTCACATGATAGTTAGATCCTTACAGTCACCTCCATCTGCATCAGTTTTGGCTAATCTCCAGGAACTTCAGTGTCTCAAGAAGGAAATTGCAATGGTCTATATAGAAGAAGCGCTGAGAAACCAAAGAGACAATATTGAACCATGCAAGGTTCGTCTCAAGGAAATTATTGAGTTACTTAAATTGACATCAAATCAGGAGCTCTTAAAAGAAAGCATTGCTGTAGAAAAGGAAAGGTTGAACACTGAAGCCAATAAAATGATAGCGGACATTGAAGAAATTAATGAAATTGTGAATCTTGTCCGTAGTTTGCGTGATTATGTGATCAAAACTGAGTGCCCTGTAGTCAAGAGTGGTCTCTCAATCCCTCCATACTTCCTCTGTCCTTTATCGTTGGAACTCATGTTGGATCCTGTTATTGTGGCTTCGGGTCAAACATATGAGAGGCAATCCATCCAAAAGTGGCTTGATCATGGACTGACAGTTTGTCCCAAAACTCGTCAGAGACTTACCCATACAAATCTCATTCCCAATTACACTGTCAAAGCTATGATAGCAACTTGGTGTGAGGAAAATAATGTCAAACTTTCTGGTAACTCTGAGCACAAAAAATATGCCTGTGTCCCCATGGATAATTTATTGCCTCAAGATTTAACTCATGATTGCCGTGCTGGGTCTTTATCTAGTAGCAATTCCATTTCAAGATCATCTCTTCAAACTGAAAATGCATTTGAAAAGCAAAAGGGTAATAACTCTACCAGATTATGCGGAGAATACAATGGATGCCAGAGTGAAGCAGCTGAAAAGTGTGAGCAAGAGTCCCCATATACTCACAGCAGAAGTGAATCATTTTCAAGTTCAATTTCTAGTACTGATTGTGCAGTTTCGAAAGAGGTGTCAGGGATATCCAGTAGGCATCAAAATGTGAAGGTGCTCTCTGGAGAAATCACAAACACGTGTCCTTCACCTGGTAACAAACAATCAGGGATATCTCCTTTGTTATCTGGAAAGACATTTCAAAACCCTGGATCAAATGTGGGATTGTTGGAGAATGGAAACAATAATGATAATAATAATAACAATAGTAATAATAATAGTCTTTCAATATTTGATTCCCATTCTGTTTTCAACTCCGGGTCAGATGAATTGACCACATCATCTCAAGCCAGTAGATTGATTGAAGATCTTCACAGCCAATCAATTGAAACACAGACTACTGCTGCAGAAGAATTGAGGCTCCTCACGAAGCATAACCGGGAAAACCGTACCATTGTAGGGCAGTGTGGGGCTGCCATGCCTTTGCTTTCATTGCTATATTCAGACATGAAGGTAACACAAGAGCATGCTGTGACAGCTCTACTGAACTTGTCAATTAATGAAGATAACAAGGCCTTGATCATGGAAGCAGGAGCCATAGAACCTCTAATCCATGTTTTGAAGACAGGAAATGATAGTGCCAAGGAGAATTCTGCGGCAACTCTATTCAGCCTCTCAGTAATTGAGAACAATAAGGCAAGAATTGGTCGTTCTGGAGCAGTTAAAGCTTTGGTTGATCTTCTTGCCTCAGGGACTCTTAGAGGAAAGAAGGATGCGGCTACTGCTTTATTTAACCTGTCAATATTTCATGAGAATAAAGCTCGTATAGTTCAAGCTGGAGCAGTGAAATTTCTGGTTCGGTTAATGGACAATGCTGGTGGAATGGCTGACAAGTCTGTTGCTCTTCTGTCAAACCTGTCAACAATTCCAGAGGGCCGAATAGAAATTGCAAGGGAAAGGGGTATCCCCTTACTTGTTGAATTTGTTGAGTCAGGTTCCCAGAGGGGAAAGGAAAATGCTGCCTCCATTCTCTTGCAATTGTGCCTTCATAGTTCTAAGTTCTGTAATCTGGTTTTGCAAGAAGGAGCTGTCCCTCCCCTAGTTGCATTGTCAGTATCTGGTACACCAAGAGCAAAGGAAAAGGCACAACAGCTTCTCAGCCATTTTCGCAATCAGCGGGAACAAGCTGCTTCTGGGAAGGGAAAATCATGA 2373 0.4092 MHIGQTDTTSVKCLINSISRFIHLVSCQTMKPVTFQKICNNMVGVLKRLKPVLDDVMDHLIPSDVNLCKECEELDKRVNEARDFIEKWSPKTSRIHSVLQGGTLLIKLQSTSLDICHMIVRSLQSPPSASVLANLQELQCLKKEIAMVYIEEALRNQRDNIEPCKVRLKEIIELLKLTSNQELLKESIAVEKERLNTEANKMIADIEEINEIVNLVRSLRDYVIKTECPVVKSGLSIPPYFLCPLSLELMLDPVIVASGQTYERQSIQKWLDHGLTVCPKTRQRLTHTNLIPNYTVKAMIATWCEENNVKLSGNSEHKKYACVPMDNLLPQDLTHDCRAGSLSSSNSISRSSLQTENAFEKQKGNNSTRLCGEYNGCQSEAAEKCEQESPYTHSRSESFSSSISSTDCAVSKEVSGISSRHQNVKVLSGEITNTCPSPGNKQSGISPLLSGKTFQNPGSNVGLLENGNNNDNNNNNSNNNSLSIFDSHSVFNSGSDELTTSSQASRLIEDLHSQSIETQTTAAEELRLLTKHNRENRTIVGQCGAAMPLLSLLYSDMKVTQEHAVTALLNLSINEDNKALIMEAGAIEPLIHVLKTGNDSAKENSAATLFSLSVIENNKARIGRSGAVKALVDLLASGTLRGKKDAATALFNLSIFHENKARIVQAGAVKFLVRLMDNAGGMADKSVALLSNLSTIPEGRIEIARERGIPLLVEFVESGSQRGKENAASILLQLCLHSSKFCNLVLQEGAVPPLVALSVSGTPRAKEKAQQLLSHFRNQREQAASGKGKS* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1977 790 MobiDBLite consensus disorder prediction 430 451 - -
Pvu7g1977 790 Gene3D - 489 639 IPR011989 -
Pvu7g1977 790 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 585 627 IPR000225 GO:0005515
Pvu7g1977 790 SUPERFAMILY RING/U-box 236 311 - -
Pvu7g1977 790 SUPERFAMILY ARM repeat 504 776 IPR016024 -
Pvu7g1977 790 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 544 586 IPR000225 GO:0005515
Pvu7g1977 790 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 667 708 IPR000225 GO:0005515
Pvu7g1977 790 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 236 311 IPR013083 -
Pvu7g1977 790 SMART arm_5 696 736 IPR000225 GO:0005515
Pvu7g1977 790 SMART arm_5 574 614 IPR000225 GO:0005515
Pvu7g1977 790 SMART arm_5 615 655 IPR000225 GO:0005515
Pvu7g1977 790 SMART arm_5 656 695 IPR000225 GO:0005515
Pvu7g1977 790 SMART arm_5 533 573 IPR000225 GO:0005515
Pvu7g1977 790 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 3 11 784 - -
Pvu7g1977 790 Pfam U-box domain 237 308 IPR003613 GO:0004842|GO:0016567
Pvu7g1977 790 Coils Coil 192 212 - -
Pvu7g1977 790 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 626 668 IPR000225 GO:0005515
Pvu7g1977 790 Pfam Armadillo/beta-catenin-like repeat 618 654 IPR000225 GO:0005515
Pvu7g1977 790 Pfam Armadillo/beta-catenin-like repeat 574 613 IPR000225 GO:0005515
Pvu7g1977 790 PANTHER U BOX DOMAIN-CONTAINING 11 784 - -
Pvu7g1977 790 ProSiteProfiles U-box domain profile. 236 310 IPR003613 GO:0004842|GO:0016567
Pvu7g1977 790 SMART Ubox_2 240 303 IPR003613 GO:0004842|GO:0016567
Pvu7g1977 790 Gene3D - 643 787 IPR011989 -
Pvu7g1977 790 CDD RING-Ubox_PUB 241 283 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1977 Pvu-Chr7 42951648 42956680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1977 7 790 U-box Gene Family AT3G54790 53.759 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1977 - - gmx:100800949 1288.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1977 7 42951648 42956680 Pvu7g1977 7 42951648 42956680 ECH