Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1969 ATGAATACCTCTCTCTCTTCAATGGCGGAGTACTCGCTAACAATGGCGGCAGCAGATGAAGATTCCCTTGGAATTCGCGTTCGCGGGATGCAATTTTCCTACGAAGCGCAACAGCCGCCGCTCTTTCTCGACTTCAAACTCAACGTCGAGCCTGGATCGCGGTGCCTCCTCGTCGGTGCCAACGGATCCGGTAAGACGACTTTGCTGAAGATTCTAGCGGGGAAGCATATGGTTGGAGGAAGAGACGTTGTGCGCGTGTTGAATGGTTCCGCTTTTCACGACACTCAACTCGTCTGTAGCGGAGATCTCGCTTATTTGGGCGGATCCTGGAGCAAAAACGTTGGCTCCGCTGGAGAAATTCCGCTTCAAGGAGACTTCTCTGCTGAACATATGATCTTTGGAGTTGAGGGTGCTGACCCAGATCGGAGAGACAAGTTAATTGAGCTGCTTGATATCGATCTGCAGTGGCGAATGCACAAGGTATCTGATGGGCAGCGGCGTCGAGTGCAAATCTGTCTCGGTCTTCTTTATCCATATAAGGTTCTCTTGCTTGATGAGGTCACTGTTGATCTGGATGTTGTTACTCGGATGGATTTATTGGACTTCTTTAGGGAAGAATGTGAACAGAGAGAAGCTACAATCGTATATGCAACTCATATTTTTGATGGACTAGAGACATGGGCAACTCATTTGGCATACATACAAGATGGTGAACTGAGAAGAGCAGAAAAGATATCAGATGTCAATGAGTTGAAATCTTCAATTAATCTGCTGTCTGTTGTTGAGGCCTGGCTCCGTGCTGAAACAAAGGTTGTAAAAAAGAACCCTGTCCAAAAGACTTTTGCTAGTAATCCATTCTTTTCATCCAGACACATGGCGTACTATCGATAG 891 0.4691 MNTSLSSMAEYSLTMAAADEDSLGIRVRGMQFSYEAQQPPLFLDFKLNVEPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVRVLNGSAFHDTQLVCSGDLAYLGGSWSKNVGSAGEIPLQGDFSAEHMIFGVEGADPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLYPYKVLLLDEVTVDLDVVTRMDLLDFFREECEQREATIVYATHIFDGLETWATHLAYIQDGELRRAEKISDVNELKSSINLLSVVEAWLRAETKVVKKNPVQKTFASNPFFSSRHMAYYR* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1969 296 SMART AAA_5 51 238 IPR003593 -
Pvu7g1969 296 Pfam ABC transporter 45 188 IPR003439 GO:0005524
Pvu7g1969 296 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 23 296 - -
Pvu7g1969 296 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 25 261 IPR003439 GO:0005524
Pvu7g1969 296 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 253 IPR027417 -
Pvu7g1969 296 Gene3D - 24 276 IPR027417 -
Pvu7g1969 296 PANTHER ABC TRANSPORTER I FAMILY MEMBER 21 23 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1969 Pvu-Chr7 42795244 42798620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1969 25 253 Calmodulin-binding Proteins AT2G36910 22.822 7.03e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1969 K12608 - gmx:100788503 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1969 7 42795244 42798620 Pvu7g1969 7 42795244 42798620 ECH