Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1968 ATGGATTCTGCAAGGAGTTGGCTTCAGAAGTTCCAGCCTCGAGATAGAACCAGGGCTGCTGCGAAGAAAAAGGAGGAGGATAGTAATGGAGAAAACGAGGATTTGAATGCGGCGGTGGATGAAGCAGTGCTTTCTAGTGTCACGAAACAGAAGGTGGCCGCAGCAAAGCAGTACATTGAAAACCATTACAAGGAGCAAATGAAGAACCTTCAGGAGAGGAAGGAGCGTCGAACCATCTTGGAAAAGAAGTTGGCTGATGCCGATGTCTCTGAGGAGGATCAAAACAACCTGCTTAAATTTTTAGAGAAAAAGGAAACTGAATATATGCGCCTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAGTTATTAACAATGATTGGAAAAGGAGCATTTGGAGAGGTCAGAGTCTGTAGGGAGAAGACTAGTGGTCATGTGTATGCAATGAAGAAGCTAAAAAAATCAGAGATGCTTCGCAGAGGCCAGGTTGAGCATGTTAAAGCTGAAAGGAATCTCCTTGCAGAGGTTGACAGCAATTGCATAGTCAAACTTTATTGTTCTTTCCAGGATGCTGAATATTTGTATCTTATTATGGAGTATCTACCGGGTGGGGATATGATGACTCTACTAATGAGGAAGGATACCTTGACTGAAGATGAAGCAAGATTTTATGTAGGAGAAACTGTTCTGGCTATTGAATCTATACATAAACACAATTATATACACAGGGATATCAAGCCGGACAATTTATTACTTGAAAGATACGGGCACTTGAAATTGTCAGATTTTGGACTTTGTAAACCATTAGATTGCAATACACTTGAAGAAAAGGATTTTTCTGTGGGTCAGAATGTGAATGGAACTACACAAAATGATGAGCGGACAGCTCCTAAACGTTCACAACAAGAACAACTTCAACACTGGCAAATGAACAGGAGAACACTTGCTTATTCCACAGTTGGTACACCCGATTATATTGCTCCAGAAGTTCTTTTGAAGAAAGGTTATGCGATGGAATGTGATTGGTGGTCACTCGGAGCTATTATGTATGAAATGTTGGTGGGATATCCACCTTTTTATTCTGATGATCCAATGTTGACTTGTAGGAAGATAGTAAATTGGAAAGCTTACTTGAAATTTCCTGAAGAAGCTAGGCTGTCCCCAGAAGCTAAAGATCTTATTAGTAAGCTTTTGTGTAATGTCAGTCATAGGCTGGGGTCAAATGGTGCAGATGAAATAAAGGCTCATCCTTTCTTCAAAGGTGTTGAATGGGATAAGCTGTATCATATGGAAGCTGCATTTATTCCTGAGGTCAATGATGAGTTGGACACTCAAAATTTTGAAAAGTTTGATGAGTCTGACAGCCAAAGTCAATCATCATCAAGATCTGGTCCATGGAGGAAGATGCTTTCATCTAAGGACTTAAATTTTGTTGGATACACATACAAGAACTTTGAAATTGTCAACGATTATCAAGTTCCTGGGATGGCTGAACTGAAGAAGAAACAGTCCAAACCAAAGAGGCCAACCATCAAGTCACTTTTCGAAACACCAGAGCAAGAGTTGTCTGATACATCTTCTCAAGGAAGCTTTTTAAAGCTCTTGCCACCCCAGTTAGAGATATCTCGTAGAGACAAGAATCTTCCTCCCAGGTCATAA 1659 0.4045 MDSARSWLQKFQPRDRTRAAAKKKEEDSNGENEDLNAAVDEAVLSSVTKQKVAAAKQYIENHYKEQMKNLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTSGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDAEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLERYGHLKLSDFGLCKPLDCNTLEEKDFSVGQNVNGTTQNDERTAPKRSQQEQLQHWQMNRRTLAYSTVGTPDYIAPEVLLKKGYAMECDWWSLGAIMYEMLVGYPPFYSDDPMLTCRKIVNWKAYLKFPEEARLSPEAKDLISKLLCNVSHRLGSNGADEIKAHPFFKGVEWDKLYHMEAAFIPEVNDELDTQNFEKFDESDSQSQSSSRSGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKKKQSKPKRPTIKSLFETPEQELSDTSSQGSFLKLLPPQLEISRRDKNLPPRS* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1968 552 CDD STKc_NDR_like 119 483 - -
Pvu7g1968 552 MobiDBLite consensus disorder prediction 1 37 - -
Pvu7g1968 552 MobiDBLite consensus disorder prediction 9 31 - -
Pvu7g1968 552 MobiDBLite consensus disorder prediction 516 533 - -
Pvu7g1968 552 MobiDBLite consensus disorder prediction 500 552 - -
Pvu7g1968 552 Pfam Protein kinase C terminal domain 438 482 IPR017892 GO:0004674|GO:0005524|GO:0006468
Pvu7g1968 552 Gene3D Transferase(Phosphotransferase) domain 1 205 437 - -
Pvu7g1968 552 SMART serkin_6 121 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1968 552 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 550 - -
Pvu7g1968 552 Gene3D Phosphorylase Kinase; domain 1 119 448 - -
Pvu7g1968 552 ProSiteProfiles AGC-kinase C-terminal domain profile. 420 492 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pvu7g1968 552 ProSiteProfiles Protein kinase domain profile. 121 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1968 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Pvu7g1968 552 SMART pkinase_C_6 420 484 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pvu7g1968 552 MobiDBLite consensus disorder prediction 282 303 - -
Pvu7g1968 552 Coils Coil 63 83 - -
Pvu7g1968 552 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Pvu7g1968 552 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 550 - -
Pvu7g1968 552 SUPERFAMILY Protein kinase-like (PK-like) 94 473 IPR011009 -
Pvu7g1968 552 Pfam Protein kinase domain 122 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1968 Pvu-Chr7 42778808 42787102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1968 1 545 AGC Kinase Gene Family AT3G23310 75.912 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Pvu7g1968 Pkinase 1.7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1968 K08790 - gmx:100820558 1008.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1968 7 42778808 42787102 Pvu1g1681 1 42311850 42316492 PCT