Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1967 ATGAAAGTGGGATTCGAGCTGGTTCATGCAAATCATAATCCAAACATGATTCGTCCACACATGCATGAAACATGGGATCACTACTCAAATATTACTTCCCTGCCATTTTCAGCTCCAAGTCCAACTCCATCAAACCTATATCCAAAACCAGCAACAGAAAACCACTGCCTAAACTTGGGGCAGAATGAACTCTCTGATTGGATGGAGGAACACATTGGTGACATCACCAAACACCTTGTTGAAGACTTACCAGAAACCAGTTCTGATAGCTTGATGGCTAATAACACAGCAAGGGTTTCCCATCACAACTTTGTTCCCTCACTTTTGCCCAACTTCACTCAAAGAAAAGCTTCATGTTTTAGACAATTTGAGGCCATCACCAACGACCCCCCGAACTTCAATCTTCACTCGGGTTTAGATGATAGCTACAATGTTTGTGATCAAGGGTTGAGCCTGATAACCCTTCTAATGGAGTGTGCAGTGGCAATTTCAGTTGAGAACCTGGGTGAGGCTCATAGGATGTTACTAGAGCTAACACAAGTGGCCTCACCCTACAAAGCGTCATGTGCTGAACGTGTTGTTGCTTATTTTGCCAAGGCCATGACTGGGAGGGTGATGAATTCTTGGCTTGGGGTGTGTTCTCCTTTGGTTGATCACAAGAGCATTAACTCGGCATTCCAAGTGTTCAACAACGTTTCCCCTTTCATAAAATTTGCTCACTTCACTTCCAACCAGGCAATCCTTGAGGCAGTGAACCATTGTGACAGTATTCACATCATTGACTTGGACATCATGCAAGGGCTGCAATGGCCGCCTTTTTTCCACATATTAGCCACCAGAATGGAGGGTCCACCACAGGTCACGATGACATGTTTGGGAACCTCAATGGAACTCCTTGTTGAAACTGGTAAACAACTCTCAAACTTTGCAAGAAGGCTTGGCATGTCATTCAAGTTCCACCCCATTGCAAGCAAGTTTGGGGAAGTGATTGATGTGTCCATGTTGCATGTAAAGCCTGGCGAGGCAGTGGCAGTGCATTGGTTGCAGCATTCACTCTACGATGCAACTGGACCTGATTGGAAAACACTGAGGCTCCTTCAGGAGTTGAACCCAAGAATCATTACCTTGGTAGAGCAGGATGTGAACCATGGAGGCTCTTTCTTGGACCGTTTTGTGGCCTCCTTGCACTACTACTCCACCCTTTTTGATTCTCTTGGAGCATACTTGCACTTTGATGATTCAAACAGGCACCGAGTGGAGCATGGCCTTCTCTCCAGGGAGATCAACAATGTGTTGGCCATAGGAGGCCCTAAGAGGAATGGTGAAGACAAGTTTAGGCAGTGGAGAACCGAACTTGCTAGGCACTGTTTTGCACAGGTTCCAATGAGTGCCAATTCAATGGCTCAAGCTCAGTTGATATTGAACATGTTTTCACCAGCTTATGGGTATAGCCTTGCACAAGTTGATGGCACATTAAGGCTTGGTTGGAAGGATACAAGTTTGTACACGGCTTCTGCATGGACCTGCTGTACTTCTAACTAG 1542 0.4572 MKVGFELVHANHNPNMIRPHMHETWDHYSNITSLPFSAPSPTPSNLYPKPATENHCLNLGQNELSDWMEEHIGDITKHLVEDLPETSSDSLMANNTARVSHHNFVPSLLPNFTQRKASCFRQFEAITNDPPNFNLHSGLDDSYNVCDQGLSLITLLMECAVAISVENLGEAHRMLLELTQVASPYKASCAERVVAYFAKAMTGRVMNSWLGVCSPLVDHKSINSAFQVFNNVSPFIKFAHFTSNQAILEAVNHCDSIHIIDLDIMQGLQWPPFFHILATRMEGPPQVTMTCLGTSMELLVETGKQLSNFARRLGMSFKFHPIASKFGEVIDVSMLHVKPGEAVAVHWLQHSLYDATGPDWKTLRLLQELNPRIITLVEQDVNHGGSFLDRFVASLHYYSTLFDSLGAYLHFDDSNRHRVEHGLLSREINNVLAIGGPKRNGEDKFRQWRTELARHCFAQVPMSANSMAQAQLILNMFSPAYGYSLAQVDGTLRLGWKDTSLYTASAWTCCTSN* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1967 513 Pfam GRAS domain family 152 508 IPR005202 -
Pvu7g1967 513 PANTHER OS05G0485400 PROTEIN 30 509 - -
Pvu7g1967 513 ProSiteProfiles GRAS family profile. 143 508 IPR005202 -
Pvu7g1967 513 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 30 509 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1967 Pvu-Chr7 42773729 42775270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1967 147 508 GRAS Transcription Factor Family AT3G54220 55.827 7.27e-136 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu7g1967 GRAS 2.1e-104 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1967 - - gmx:100775656 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1967 7 42773729 42775270 Pvu7g1967 7 42773729 42775270 ECH