Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1966 ATGGAGCATGTGATTGGTGGCAAGTTTAAATTGGGAAGGAAAATTGGGAGTGGGTCTTTTGGGGAGCTCTATTTAGGTGTTAATATACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAGCCTGTGAAGACCAGGCATCCACAGCTTCACTATGAGTCAAAACTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCACCTCAAGTGGTTTGGAACTGAGGGAGACTACAATGTCATGGTTATTGACCTTCTTGGACCAAGTCTGGAAGATTTATTCAATTATTGTAACCGGAAGTTCACACTGAAGACTGTGTTAATGCTTGCTGATCAGTTAATTAACAGAGTTGAATATATGCATTCAAGAGGTTTCCTTCACCGTGACATCAAGCCCGACAATTTCTTAATGGGTTTAGGACGGAAAGCAAATCAAGTGTATGCCATTGATTATGGCCTTGCAAAAAAGTATAGGGATCTTCAGACTCATAGGCACATACCATACAGGGAAAACAAGAACCTTACAGGTACAGCACGCTATGCAAGTGTCAATACTCATATTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTCATGTATTTCTTAAGAGGAAGTCTTCCCTGGCAAGGACTTAAGGCTGGCACCAAAAAACAAAAATATGATAAAATCAGTGAGACAAAGGTGTCCACTCCCATAGAGGTGCTTTGCAAATCTTATCCCACTGAATTTGTATCATACTTCCACTATTGCCGATCATTGCAATTTGAGGACAAACCAGATTATTCATATTTAAAGAGACTTTTCCGAGACCTGTTTATTAGAGAAGGCTATCAGTTTGACTACATTTTTGACTGGACTATGTTAAAGTATCCACAGATCAGTAGCAGCTCAAGAGGGCGGCATGTCACTGGCAAGGCAGCTATGCAAGCAAGTCCACATGTACAAAAGCCAGAAAAAATCTCAGTTGGGAAAGACATTCGAGAGAAATTCTCTGGTGCAGTTGAAGCATTCTCCAGGAGGAATCCTGCAGGTTCAAGTCCTCATGTTGATCACATCAAACAGAGGAGTTTTGAAGATGTACCGATGCAAAAGGATTTGCACTATGGACAGCACAATAGTGGTCGATATGGCAGCAGTTCTAGAAGAGCCATGATCACATCAAACAAGCCAGTTTCCTCAGGTGACCATACTGGCAGGCCAACCATAACTGGGAGCCGTCCATCTGGTGTTCATAGAGTTCAACCGGCCTACGACACCAAACAAGCAAATCATGCACGCGGTTCCTCCGCCAGAGGCCACCGTGATGATACTCTGAGGAGCTTTGAGCTCCTCAACATCAGGAAGTAA 1362 0.4332 MEHVIGGKFKLGRKIGSGSFGELYLGVNIQTGEEVAVKLEPVKTRHPQLHYESKLYMLLQGGTGIPHLKWFGTEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYAIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHIGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISETKVSTPIEVLCKSYPTEFVSYFHYCRSLQFEDKPDYSYLKRLFRDLFIREGYQFDYIFDWTMLKYPQISSSSRGRHVTGKAAMQASPHVQKPEKISVGKDIREKFSGAVEAFSRRNPAGSSPHVDHIKQRSFEDVPMQKDLHYGQHNSGRYGSSSRRAMITSNKPVSSGDHTGRPTITGSRPSGVHRVQPAYDTKQANHARGSSARGHRDDTLRSFELLNIRK* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1966 453 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1966 453 Gene3D Transferase(Phosphotransferase) domain 1 1 340 - -
Pvu7g1966 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pvu7g1966 453 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1966 453 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pvu7g1966 453 PANTHER CASEIN KINASE-RELATED 1 442 - -
Pvu7g1966 453 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1966 453 MobiDBLite consensus disorder prediction 377 413 - -
Pvu7g1966 453 MobiDBLite consensus disorder prediction 373 418 - -
Pvu7g1966 453 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Pvu7g1966 453 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 442 - -
Pvu7g1966 453 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1966 Pvu-Chr7 42753181 42759880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1966 8 213 MAP Kinase Kinase Kinase AT3G06030 25.000 2.48e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pvu7g1966 Pkinase 2.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1966 K08960 K08959 gmx:100789031 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1682 1 42345062 42351275 Pvu7g1966 7 42753181 42759880 PCT