Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1927 ATGGCAGGTAATAGTAGCTCGGAGGGGTTAGGAGATGATTTCTTCGAACAGATCTTAGCAGTGCCTGAAGCTCCGGTGGGATATGGCAGAACCGTAGCCACTGACGTTGGAATGCTGCAATTAGGGTCCTCAAATTCAACTGCCGCTGCTCTCAGAGGTGGTGGAATGATGCCTCTGGGCATGAATTTGGAGCAATCTGCTTTTCTAAGCCACCATGATTCCAGAAACTTAGTTGACGACGTTGTTAATGTTGATCCCAGCGTTCACAATAATCACCACCACCACCACCACCACCACCACCATCAACACCTCACTCTCCACAATAACAACTCATCACCCTCTTCTACTGCACCAATCACCGATCGCGATTCGATGCATGTGAGAGGTTTGTTTTCAGCGTTTGGACAGTTGCACAGTCCTACGCTTGTTCCCTCTGTCCGCCCCACGCTGTCATCGCCGCCGCCTCCTCAGCCCCAGCTCCACCTCCACCACCACCATAACCAACAGGCGTTTCAGGGCCAGGGAGGTGGAGGTCCAGCGTTAATGAGTTGTACCCCACAAGCACCTATCATTCGCCCTCGTGTGAGAGCAAGAAGAGGGCAAGCCACAGATCCACACAGTATTGCTGAACGGTTGCGTCGCGAAAGAATTGCTGAAAGAATGAAGGCACTGCAAGAGTTGGTTCCCAGCATTAATAAGACGGACAGAGCAGCGATGCTTGATGAAATTGTGGATTATGTGAAGTTCCTAAGGCTCCAGGTTAAGGTCCTGAGCATGAGTAGACTGGGGGGAGCTGGTGCAGTTGCTCAACTTGTGGCTGATGTTCCCCTTTCTGCAGTGGAGCAAGGGGAGGACATAGAAGGTGGCGCCAATGAGCAAGCCTGGGACAAGTGGTCCAATGACGGTACAGAACAACAAGTTGCTAAACTTATGGAAGAAGATGTGGGTGCGGCTATGCAATTTCTTCAGTCCAAGGCACTTTGTATCATGCCCATATCTCTAGCCTCAGCCATTTTTCGTATGCCTCAATCAGAATCATCAACAGTCATCAAGCCTGAATCAAACAGCCACTGA 1074 0.5056 MAGNSSSEGLGDDFFEQILAVPEAPVGYGRTVATDVGMLQLGSSNSTAAALRGGGMMPLGMNLEQSAFLSHHDSRNLVDDVVNVDPSVHNNHHHHHHHHHHQHLTLHNNNSSPSSTAPITDRDSMHVRGLFSAFGQLHSPTLVPSVRPTLSSPPPPQPQLHLHHHHNQQAFQGQGGGGPALMSCTPQAPIIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSAVEQGEDIEGGANEQAWDKWSNDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRMPQSESSTVIKPESNSH* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1927 357 Pfam Helix-loop-helix DNA-binding domain 206 250 IPR011598 GO:0046983
Pvu7g1927 357 SMART finulus 207 256 IPR011598 GO:0046983
Pvu7g1927 357 MobiDBLite consensus disorder prediction 106 121 - -
Pvu7g1927 357 MobiDBLite consensus disorder prediction 90 105 - -
Pvu7g1927 357 MobiDBLite consensus disorder prediction 85 121 - -
Pvu7g1927 357 Gene3D - 196 258 IPR036638 GO:0046983
Pvu7g1927 357 PANTHER DEHYDROGENASE, PUTATIVE, EXPRESSED-RELATED 8 344 - -
Pvu7g1927 357 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 8 344 - -
Pvu7g1927 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 199 260 IPR036638 GO:0046983
Pvu7g1927 357 MobiDBLite consensus disorder prediction 142 177 - -
Pvu7g1927 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 201 250 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1927 Pvu-Chr7 42392601 42397260 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1927 191 355 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 78.313 1.34e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pvu7g1927 HLH 3.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1927 - - vun:114189791 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1927 7 42392601 42397260 Pvu7g1927 7 42392601 42397260 ECH