Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1926 ATGCCCCGGGGCTCTCGTTTTGTACAGCCGCGACCCTCCTCCCCTTCCTTCGCATCACATCACACACAATCAAACGATATGGATAGGGTCTTCTCAGTTGACGAAATCTCCGATCACTTCTGGCCATCGCCGCCGATCCCCGTCTCCGCCGCCGATGAGGCCTCCAAGATGAGCCGCAGCGCTTCCGAGTGGGCCTTCCAACGCTTCCTCCAGGAAGCTTCCGCACCCTCTCCCCCCTCTCCTTCCTCCGCCGCCACCGCCGCTCCTGCCGCCCCCTCCGACGTCGTCTTGGTCGAGATCGATGATCATCCCAAACCTGCCCCGGCTCCTCCCCTAAACGCTGCCGTTTTGCCCAATACCCCTGCTCCCGTGCCCCTTGACTCCGATGAGTACCAGGCCTTCCTCAAGAGCAAGCTCAACCTTGCATGCGCAGCTGTCGCCATGACTAGGGCATCTTTGGCTAAATCTCAAGAGCCAATCCCTTTTGTTGATGGTGGATCACAGCCTATCGATCCTTCTCAAGTTGGATCTCAGACTACTTCTAAAGCATCTATCCCTTCTGGAAATGATCCATCTAACTTACAAGACAAAGATACGAACGTACCAGTTGGGATGCCTTCCATACCTTCCATGCAAAAGAAACCTGTTGTTGCAGTTAGGCCATCAACAAGTGGATCATCAAGAGAACTGTCAGATGATGAGGATGCTGAGGGAGAGACATCTATGAATGATATGGACCCTGCTGATGCAAAAAGAGTAAGGAGGATGTTATCCAATAGAGAGTCTGCCCGGCGCTCTAGAAGAAGAAAGCAGGCTCATTTAACTGACCTAGAAACACAGGTTTCTCAATTAAGAGGTGAAAATTCTACCTTGTTGAAGCGCCTTACTGATGTAAGTCAGAAATACAGTGAATCTGCTGTTGACAACAGAGTTTTAAAAGCTGATGTTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAGACTGTCAAAAGAATTACTGGGTTGAACCCAATGGTTCATGCCATGGCTGACATGTCATCATTGGGCATGCCATTATTTGATGGAAGAAGCCCTTCAGACACTTCAGCTGATGCAGCTGTTCCTGTGCAAGATGATCATCATCAGTTCTATCAACCCACATCTAATAATCCTATTCCCAATCATGATCCAATAGTGAACGATGGATTGGGGGGCATATCTTCAATTGAAAATGTGCAGCAGAACTCTACAGAAGTGGTAGGTGGGAACAAGATGGGTCAAACTACTTCCCTGCAGCGGGTAGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGGTGTGGATTCCTGTGGCCCTCCCTCTAATGGGAAGCAGTAG 1362 0.4978 MPRGSRFVQPRPSSPSFASHHTQSNDMDRVFSVDEISDHFWPSPPIPVSAADEASKMSRSASEWAFQRFLQEASAPSPPSPSSAATAAPAAPSDVVLVEIDDHPKPAPAPPLNAAVLPNTPAPVPLDSDEYQAFLKSKLNLACAAVAMTRASLAKSQEPIPFVDGGSQPIDPSQVGSQTTSKASIPSGNDPSNLQDKDTNVPVGMPSIPSMQKKPVVAVRPSTSGSSRELSDDEDAEGETSMNDMDPADAKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSESAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMVHAMADMSSLGMPLFDGRSPSDTSADAAVPVQDDHHQFYQPTSNNPIPNHDPIVNDGLGGISSIENVQQNSTEVVGGNKMGQTTSLQRVASLEHLQKRIRGGVDSCGPPSNGKQ* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1926 453 MobiDBLite consensus disorder prediction 258 277 - -
Pvu7g1926 453 MobiDBLite consensus disorder prediction 71 87 - -
Pvu7g1926 453 MobiDBLite consensus disorder prediction 159 251 - -
Pvu7g1926 453 MobiDBLite consensus disorder prediction 170 200 - -
Pvu7g1926 453 MobiDBLite consensus disorder prediction 9 26 - -
Pvu7g1926 453 SMART brlzneu 247 311 IPR004827 GO:0003700|GO:0006355
Pvu7g1926 453 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 254 269 IPR004827 GO:0003700|GO:0006355
Pvu7g1926 453 Coils Coil 267 294 - -
Pvu7g1926 453 PANTHER BZIP TRANSCRIPTION FACTOR 27 434 - -
Pvu7g1926 453 MobiDBLite consensus disorder prediction 1 31 - -
Pvu7g1926 453 CDD bZIP_plant_GBF1 252 303 IPR045314 GO:0003700|GO:0006355
Pvu7g1926 453 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 249 304 IPR004827 GO:0003700|GO:0006355
Pvu7g1926 453 PANTHER BASIC LEUCINE ZIPPER 63 27 434 - -
Pvu7g1926 453 Coils Coil 309 329 - -
Pvu7g1926 453 Pfam Basic leucine-zipper C terminal 318 442 IPR020983 -
Pvu7g1926 453 Pfam bZIP transcription factor 250 303 IPR004827 GO:0003700|GO:0006355
Pvu7g1926 453 Gene3D - 250 306 - -
Pvu7g1926 453 MobiDBLite consensus disorder prediction 71 93 - -
Pvu7g1926 453 SUPERFAMILY Leucine zipper domain 251 301 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1926 Pvu-Chr7 42378455 42385747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1926 27 340 bZIP Transcription Factor Family AT4G02640 41.071 4.84e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu7g1926 bZIP_C 1.9e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1926 K25784 - gmx:100170702 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1926 7 42378455 42385747 Pvu7g1926 7 42378455 42385747 ECH
Pvu6g1067 6 21866846 21870121 Pvu7g1926 7 42378455 42385747 PCT