Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1919 ATGTTCGATGGAGTACCTGAGCAGTTCCACCAATTCATAACTCCAAGGACCTCACTACCTCTTCACTTACCTTTCCCTCTCCATGCTTCTGGCACCCCCAATACCTTCTCTTCCAATTTTGATCCCTATAGCCCTTCCCATCAACTGCCACTCCAACCCAACAGTCTCTTGCACCCATTACACCACCCACCCTCTACCCACAAAGATGAAGCCAAGGCAGAAAACACCACCATCCCAATGAACTTCCAAATCCAGAGAGATCAAAGGCAGCAACTACCCCAGCTGATTGATCCCTGGACTAACGACGAAGTGCTTGCGCTCTTGAGGATCAGATCTAGCACCGAGAGTTGGTTCCCAGAACTCACTTGGGAACATGTCTCAAGGAAGCTGGCAGAGCTTGGATATAAAAGGAGTGCAGAGAAGTGCAAGGAGAAGTTTGAAGAAGAAAGTAGATATTTCAACAACAACATTAATTACGGCAAGAATAATAACAATTATCGGTTTCTTAGTGAGCTTGAACAGCTTTACCATCAAGGGGGTGGTGATCATCTTGGGACCGGACAAAAGACTCAGCAACTACAGAAACAAGACAAGATGGACCACCATCCATTGGAAGAAGGGGATTCTGGAAAAGTTGAGTCATCGGTGACAAAACAAAACCACGATGCAGTAGTGGCAAAGAGTCAGGGGCGCAAGAGAAAAAGGCCCGGTAGGTTTGAAATGTTCAAGGGTTTTTGTGAGAGCATTGTGCACAAGATGATGGCGCAGCAAGAGGAGATGCACAACAAGCTCCTCGAGGACATGATGACCAGAGATGAAGAGAAGTTCACTCGAGAGGAAGCTTGGAAGAAGCAAGAGATGGAGAAAATGAACAAGGAGCTTGAGATGATGGCTCGTGAGCAAGCCATTGCAGGTGACAGACAAACCAACATTATTCAAATACTCAACAAATTCTCACTCACTTCTTCTTCAAACAAGACCCTCAAGGTAGTAACTAATGGTTCAAACCTAAAAACTCACATTACGCAAAACCCTAATCCTTCACAAAACATCCCACCTATACCCACAACACAAAACCCTACCTCAACTCTTGCACAAGACACGTTACAAGTCATCACAAATCCTTCTACTTCTTCCACTTCAGCTCAAGCTCCTCAAACCAACCCTAGTTCTTCCTCTCTAAATAGCCAGAATAATATAAATCCGGTAGAGAGAAATTCGGTTTTGAATAAAAGTTTGTCATCAAACGTTGCTGAGAAAGACGATGTTGGGAGAAGGTGGCCAAAGGACGAAGTGTTAGCACTGATAAACCTGAGGTGCACTAGTGTGAGCAACAGCAACACCAATGAGGAGAAGGAAGGGAACAATAAGGTGCCTCTGTGGGAGAGAATCTCACAAGGGATGTCGGAGTTAGGATACAGGAGGAGTGCAAAGAGGTGCAAAGAGAAGTGGGAAAACATAAACAAGTACTTCAGGAAAACCAAGGATGTTAATAAGAAGAGGTCCCTTGACTCAAGGACTTGTCCCTACTTTCATCAATTGAGCAGTCTCTATAATGAAGGAAAACTTGTTCTACAATCCGAAAGGCCAGAAAGCCACATGAATAATCCACCTGAGAATCTGGAGCAAGTGGAACCAGATCAAACACAAGCCGAGTCTTCTTCTCAAGTGGGGTCTGGTGGTTTCAGTGTGCAGCAGCAGGTTGATCATGGAGGTGAGAAAACCTTGATGCAAGTACCCTCTTTGGATTTTGATCAGTTTTAA 1764 0.4473 MFDGVPEQFHQFITPRTSLPLHLPFPLHASGTPNTFSSNFDPYSPSHQLPLQPNSLLHPLHHPPSTHKDEAKAENTTIPMNFQIQRDQRQQLPQLIDPWTNDEVLALLRIRSSTESWFPELTWEHVSRKLAELGYKRSAEKCKEKFEEESRYFNNNINYGKNNNNYRFLSELEQLYHQGGGDHLGTGQKTQQLQKQDKMDHHPLEEGDSGKVESSVTKQNHDAVVAKSQGRKRKRPGRFEMFKGFCESIVHKMMAQQEEMHNKLLEDMMTRDEEKFTREEAWKKQEMEKMNKELEMMAREQAIAGDRQTNIIQILNKFSLTSSSNKTLKVVTNGSNLKTHITQNPNPSQNIPPIPTTQNPTSTLAQDTLQVITNPSTSSTSAQAPQTNPSSSSLNSQNNINPVERNSVLNKSLSSNVAEKDDVGRRWPKDEVLALINLRCTSVSNSNTNEEKEGNNKVPLWERISQGMSELGYRRSAKRCKEKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLSSLYNEGKLVLQSERPESHMNNPPENLEQVEPDQTQAESSSQVGSGGFSVQQQVDHGGEKTLMQVPSLDFDQF* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1919 587 Pfam Myb/SANT-like DNA-binding domain 425 516 IPR044822 -
Pvu7g1919 587 Pfam Myb/SANT-like DNA-binding domain 97 175 IPR044822 -
Pvu7g1919 587 MobiDBLite consensus disorder prediction 179 234 - -
Pvu7g1919 587 MobiDBLite consensus disorder prediction 529 572 - -
Pvu7g1919 587 PANTHER - 13 577 - -
Pvu7g1919 587 ProSiteProfiles Myb-like domain profile. 98 150 IPR001005 -
Pvu7g1919 587 MobiDBLite consensus disorder prediction 529 587 - -
Pvu7g1919 587 MobiDBLite consensus disorder prediction 52 71 - -
Pvu7g1919 587 MobiDBLite consensus disorder prediction 194 212 - -
Pvu7g1919 587 ProSiteProfiles Myb-like domain profile. 426 488 IPR001005 -
Pvu7g1919 587 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 13 577 - -
Pvu7g1919 587 Gene3D - 99 155 - -
Pvu7g1919 587 Gene3D - 427 493 - -
Pvu7g1919 587 MobiDBLite consensus disorder prediction 375 401 - -
Pvu7g1919 587 CDD GT1 425 495 - -
Pvu7g1919 587 MobiDBLite consensus disorder prediction 340 361 - -
Pvu7g1919 587 SMART sant 95 152 IPR001005 -
Pvu7g1919 587 SMART sant 423 490 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1919 Pvu-Chr7 42298155 42300917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1919 1 520 Trihelix Transcription Factor Family AT5G28300 40.909 1.13e-106 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu7g1919 Myb_DNA-bind_4 2.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1919 - - gmx:100804367 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1919 7 42298155 42300917 Pvu7g1919 7 42298155 42300917 ECH
Pvu6g1052 6 21765985 21768805 Pvu7g1919 7 42298155 42300917 PCT