Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1907 ATGCTTTCCCCTTTGGTTTCTTGGTTCTTGTCCCCCTCCTCTTCCTCCTCCTCTTCCGAAGAAGAACAAAACCTTGACATCAACACTCATCATGAAAATCACCAAAACTTCAATATACAAGATCACGAAAACGACCAATATCTTAGCTCATGCGATGTGGATGACACCATTCCCCTTGCTCTCGCCGTTCCCACTGCCTCCCCGGCCGTGACGGTGGCCTTCCCGGCCGACGATGAAAGAAGCATGGTCCCCGGCACCACCACCACTGCCACCACATTTGTAACACGCTCCAAAGGGCAGTGCTCCAACAAGTATTCGGGCGTTGTGAGACAATATCAGAGGCTGTGGACGAAACAGGACGAGATGGAACTGCTGAAGGGATACCTTGATTACATGAAGCAGCATGGGAGGGCAACCACCACCCTCCACAACGACGTAGCCTCGTTGTATGATCACGTGAGGCCCAAACTGAACGTCGATTTCAACAGGAATCAGCTTGTTGAGAAGCTGCGTAGACTAAAGAGGAAACACAAATTGGCTTTGGACAAAGGCAAGGACAAGGAGGTTCCTAAAGGGAACCTCCAGGAACAGGCCATTTTTGAAATTTCACACAAGATCTGGGGCAATGACACCGATAACCTGTTAGACCAAGATTCTTTTGATGGTGCGTCAGGACGCACTCCTGAAAGCCGTTACCTTGGTGGCAACGTTAAGGTGAAGATTGATCAACTTGATAACAGTGATGAAATAGACGAGAGAGTGCCAAAGCGGTTGCGGCTACATGATGCAGAAGATGAGAACAGAGATTATGAGCAGAACAATGGTGGTAACATACAGGGCTTCATTGAGGAGACCATGAGGTCCTGTTTCTCCCCGTTGCTGAAGGAAGTGTTGGATGAAGCACACCAACAGCCACCTCCTGAGTTGGTGCCAATCCCATTGCCGCTATGTCCTGAAGATGTGGACCATGCGCAATGGACAAAACGAGGGATTTTGGAACTGGAGATGTATTTGAAGCGGTTGGAGTTGTTGCAGGATCAGATCAAGGCTAGATTGGAGGAATTGCGATCTAGATGA 1077 0.4903 MLSPLVSWFLSPSSSSSSSEEEQNLDINTHHENHQNFNIQDHENDQYLSSCDVDDTIPLALAVPTASPAVTVAFPADDERSMVPGTTTTATTFVTRSKGQCSNKYSGVVRQYQRLWTKQDEMELLKGYLDYMKQHGRATTTLHNDVASLYDHVRPKLNVDFNRNQLVEKLRRLKRKHKLALDKGKDKEVPKGNLQEQAIFEISHKIWGNDTDNLLDQDSFDGASGRTPESRYLGGNVKVKIDQLDNSDEIDERVPKRLRLHDAEDENRDYEQNNGGNIQGFIEETMRSCFSPLLKEVLDEAHQQPPPELVPIPLPLCPEDVDHAQWTKRGILELEMYLKRLELLQDQIKARLEELRSR* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1907 358 Coils Coil 334 358 - -
Pvu7g1907 358 Pfam Protein of unknown function, DUF573 113 208 IPR007592 GO:0006355
Pvu7g1907 358 PANTHER BNAANNG10740D PROTEIN-RELATED 1 357 IPR007592 GO:0006355
Pvu7g1907 358 Coils Coil 163 183 - -
Pvu7g1907 358 PANTHER TRANSCRIPTION FACTOR GEBP FAMILY-RELATED 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1907 Pvu-Chr7 42186380 42187456 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1907 57 357 GeBP Transcription Factor Family AT5G28040 30.874 5.90e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pvu7g1907 DUF573 3.5e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1907 - - var:108344158 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1042 6 21703321 21704621 Pvu7g1907 7 42186380 42187456 PCT