Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1906 ATGCCCATGGCATCCGATCTAAACGACGCCGTTTTCCCCGAAGAAGATCTTGATGATGACGATGAAACTCAAGAGGACGAAGAGGAGGATGACGAAGACGACGACGTTTTAGATGATGACGAACCCCCTCACTCCGTCCTCGCCGCCGTAAGCCTCGCCGCCCCCTGTTCCACCGTCTCCCAAACACTCGGCACCGCATCAACTGCGATCGTTGTCGCCGATTCCTCCCCGAAGAGGCCGCGCACGGAGCAAATCGAGGAGAAAAAAGCGCTGGACGATTCGCGGAGATTGTTCCAGCGTCTGTGGACGGACGAGGACGAAATTGGGCTCTTGCAGGGGTTTCTGGACTACACGGCGCAGCGAGGATCCTCTCACCACAACGACACCGCTTTGTTCTACGACCAGATCAAGTCGAAGCTTCAACTCGGATTCAACAAGAACCAGCTCGTCGAGAAGCTCCGGAGGCTGAAGAAGAAGTACCGCAACGTCGTCACCAAAATCAGCGACGGCAAGGAAGTCTCCTTCAAGAGCCCTCACGACAAAGCCACCTTCGAAATCTCGCGGAGGATCTGGAGCAACACCGCTCCAATCACCGGTCCCGTCGAAGACGACGACGAAATCAACCCTAACCCTAATTCTAATCCAAATCCCAACCCTATTTTCGGCCAATCGGCGAAGACGCCGCTGTCGCGGAAGCGGTCGCGGCCTCGATCGGAGAAGCGCGAGTTCAACGACGGTTCAGCGTTGAACAAGGATACTAATTGTATTGGCAACAGTAACAATAATAGTAATAAAGATAATGAAAATTGTAACCATAGGCATAACTTACAGGGTGTGATTGAAGAGACAGTGAGGAGTTGCGTGTCGCCGGTGTTGAAGGAGTTGGTGATTGGTGGCATGGGATTGGGAAGTGGTTTTGGTTTTGGGGGAAGAGGTTTTGGAGTTGGAGGAGGGTTTTCAATGAATCCCTTGCAAATGCCAATGACATTGAGTCCATTGAATTTGGGCATTGGGGAAATGGGGATGGATGAGAAGTGGAGGAAGCAACAGATTTTGGAGCTGGAAGTATATTCGAAGCGTTTGGAATTGGTGCAGAATGAGATCAAGGTTGCTCTGGAGGAGTTGCGATCAACTGGTGGAGGATGA 1146 0.5192 MPMASDLNDAVFPEEDLDDDDETQEDEEEDDEDDDVLDDDEPPHSVLAAVSLAAPCSTVSQTLGTASTAIVVADSSPKRPRTEQIEEKKALDDSRRLFQRLWTDEDEIGLLQGFLDYTAQRGSSHHNDTALFYDQIKSKLQLGFNKNQLVEKLRRLKKKYRNVVTKISDGKEVSFKSPHDKATFEISRRIWSNTAPITGPVEDDDEINPNPNSNPNPNPIFGQSAKTPLSRKRSRPRSEKREFNDGSALNKDTNCIGNSNNNSNKDNENCNHRHNLQGVIEETVRSCVSPVLKELVIGGMGLGSGFGFGGRGFGVGGGFSMNPLQMPMTLSPLNLGIGEMGMDEKWRKQQILELEVYSKRLELVQNEIKVALEELRSTGGG* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1906 381 MobiDBLite consensus disorder prediction 195 269 - -
Pvu7g1906 381 MobiDBLite consensus disorder prediction 11 40 - -
Pvu7g1906 381 MobiDBLite consensus disorder prediction 1 46 - -
Pvu7g1906 381 MobiDBLite consensus disorder prediction 248 266 - -
Pvu7g1906 381 Coils Coil 146 166 - -
Pvu7g1906 381 MobiDBLite consensus disorder prediction 207 229 - -
Pvu7g1906 381 PANTHER BNAANNG10740D PROTEIN 3 379 - -
Pvu7g1906 381 PANTHER BNAANNG10740D PROTEIN-RELATED 3 379 IPR007592 GO:0006355
Pvu7g1906 381 Coils Coil 347 374 - -
Pvu7g1906 381 Pfam Protein of unknown function, DUF573 98 192 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1906 Pvu-Chr7 42181703 42183329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1906 3 381 GeBP Transcription Factor Family AT5G28040 43.548 3.38e-86 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pvu7g1906 DUF573 8.6e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1906 - - gsj:114372132 449.514