Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1898 ATGAGTGAGAGGGTGAAGAAGGAAAAGCCAACGGAGAAAAGAGAGAGGATGAAGAACATCTTCAAGAAGCTTCACATAGGTGGCAACCACGATGCTCAGCGATCCAATGAGAATTCGCCACCTGTGCCGTCGCCGTCATGCGCCGCCGATCAGTCTCAAAGCTCCGGCACCACTCCTGCGAGCCCCTCGTCGGCCTCGGCATCGGCCTCCGCCGCCGCGGTTACTCCCGGTGGCGCCGTGAGTCCTGTGGTGAATCGGCAGGACTTTTTCTCGTCGGAGGAGGAGTTTCAGGTGCAGCTAGCCCTAGCTATCAGCGCTTCCAATTCGGAGTTCCGCGACGATCCTGAGAAGGATCAGATCCACGCGGCGACGCTGTTGAGTTTAGGAGGTCTTCGAATCGATTCGACGAGGAACAAGGACGACGCGGCGGAGGCGCTGGCGAGGCAGTACTGGGAATATAATGTGCTTGACTATGAGGAGAAAGTAGTAGATGGTTTTTATGATGTATATGGGCCCTATAATGATTCGGTGATGCAAGGAAAGATGCCATCTCAAACGGATCTTGAAGCAAATCCTGGAGGTTCGGAGGTGGTCATTGTTAATAGAACAATTGATCCTGCCCTAGAAGAATTGATACAAATTGCACAATGTATTGCTTTAGACTGCCCGGTTACTAGTTTGGCACAAAGGCTTGCTGAACTTGTTACAAGTCATATGGGTGGTCCTGTAAAGGATGCTAGTATTATGTTAGCAAGATGGACAGAAACAAGAGCAGAGTTAAGGACATCTCTTCACACAATTGTATTGCCTCTTGGGTCCTTAAATATTGGGCTCTCTAGGCATCGTGCTTTGCTTTTCAAGGTATTGGCTGACAACATTAATATGCCTTGTAGACTGGTTAAAGGCAGTCATTACACTGGTGTGGAGGATGATGCTGTCAACATTATAAAGTTGGAGGGTGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCTCCAGGGACACTTATACCACTTATGCCAGCTGATATTTTAAGCACCAAGGATAGTGCCTTTAACAAGGCGTTTAATCCCAACAGTTTACCTTCCACCAAGGATACTGAATTTTCTTACTCAAGACCTATCCAACCATCTCATGGTGAAGGTAGTAGTCAAAGTTCTGTGATAAAAGATCATTCACTGCCTTGGAATGGAAAATCATATTTTGAGAAGTCAGAGCCTTCAAACATAGGTTTGAGAAGAGACACTGGTGTTGGTACTTCTAAAATTTCTAATAGAGGGACCCCTAATCAACTGGAGAATTTGCCAGCCTTGTCTGGTACTTCTCTGTACAAAGGGACCCTCGGAATGAATACAATTGGTGATGGGACGAGACTTAATGTCAATGTTGTACCATATACTCAAAACAGCCCCAATGACTCTCGAAACCTTTTTGCAGATCTTAATCCATTCCAAATAAAAGGAATGGGGAAGGCCTCTGTGCTTAACAAACCTGTGGAAAGTAAACTTCCTGAGAATAAAAGTACTAAAAACAGTACTGTTTCTGGTCGACCCCCATTGCTACTGACAAAGAAGAACCGTCATGCCCTCAATGAAGATCCCAGGAAAACTAATCATAACCCTAATGAATACAACCCTCCCTTGTTTGTTTCCAATGGTTCTTCTACATCTGAAAATATTGACCTTAGTAGTTCCAAACCATTATATAATTCAAATTTAAATAATGATGTAAATGTTCAAACTTTGGCACATGTTACTGGTTCAGTTTCACCATCTTCTGTACCTGAGCTGAACCAGATTGAGGATCTCAATGCTGGTTTTAACCAGGGGGGTCTGGAAAATTCTCAAAACTTCATGGTAGAGGCAGTTAGAGAACCTGAGAATGCCGAAATCAGACATCATGACCGGAGGATGTATACTTATGACAGATTCATGGGAAGCAATTTGAAACTGAAAGATTCAGAGAGTCCTAGCTCATCAATTGATTCCATCACAAACAGGGTGGATCAGATATTGGATGATGTAGACGTTGGTGAATGTGAGATTCCATGGGAGGATCTGTTTCTTGGTGAAAGAATTGGTATAGGTTCATACGGTGAGGTATACCAAGCCGACATGAATGGCACAGAGGTTGCTGTAAAGAAATTTTTGGATCAGGATTTTTCAGGCGCTGCATTGTCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGGTTACGGCATCCAAATATTGTTCTGTTTATGGGTGCTGTTACTCGTCCTCCTAACCTCTCAATCATTTCAGAGTATCTACCGAGAGGAAGCTTGTACCGATTACTTCATCGCCCTTATTGTCAGATTGATGAGAAACGAAGAATAAAAATGGCTTTGGACGTGGCTAGGGGCATGAATTGCTTACACACCAGCACACCTATAATTGTTCACCGAGATTTAAAGTCTCCAAATCTTTTAGTTGATAAGAACTGGAATGTTAAGGTATGCGATTTTGGGTTGTCAAGGTTGAAGCACAACACTTTTTTGTCATCCAAGTCAACTGCTGGAACGCCGGAGTGGATGGCTCCTGAAGTTCTCCGCAATGAACCCTCAAATGAAAAATGCGATGTTTATAGTTTTGGAGTCATCCTATGGGAGCTTGCCACTTTAAGGTTGCCGTGGACTGGAATGAATCCTATGCAAGTTGTTGGTGCTGTTGGTTTCCAAAATCGTAGACTTGAAATTCCTAAGGAAGTCGATCCTTTAGTTGGAAGAATAATCTGGGAGTGTTGGCAACAGGATCCAAATTTGCGGCCCTCGTTTGCACAACTCACAGTGGCTCTTAAGCCTCTGCAGCGTCTGGTTATCCCATCTCATCAAGACCAGGTAGCTCCATATGTGCCGCAGGAGATTTCTGTAAATTCAACCCCATGA 2904 0.4415 MSERVKKEKPTEKRERMKNIFKKLHIGGNHDAQRSNENSPPVPSPSCAADQSQSSGTTPASPSSASASASAAAVTPGGAVSPVVNRQDFFSSEEEFQVQLALAISASNSEFRDDPEKDQIHAATLLSLGGLRIDSTRNKDDAAEALARQYWEYNVLDYEEKVVDGFYDVYGPYNDSVMQGKMPSQTDLEANPGGSEVVIVNRTIDPALEELIQIAQCIALDCPVTSLAQRLAELVTSHMGGPVKDASIMLARWTETRAELRTSLHTIVLPLGSLNIGLSRHRALLFKVLADNINMPCRLVKGSHYTGVEDDAVNIIKLEGEREFLVDLMAAPGTLIPLMPADILSTKDSAFNKAFNPNSLPSTKDTEFSYSRPIQPSHGEGSSQSSVIKDHSLPWNGKSYFEKSEPSNIGLRRDTGVGTSKISNRGTPNQLENLPALSGTSLYKGTLGMNTIGDGTRLNVNVVPYTQNSPNDSRNLFADLNPFQIKGMGKASVLNKPVESKLPENKSTKNSTVSGRPPLLLTKKNRHALNEDPRKTNHNPNEYNPPLFVSNGSSTSENIDLSSSKPLYNSNLNNDVNVQTLAHVTGSVSPSSVPELNQIEDLNAGFNQGGLENSQNFMVEAVREPENAEIRHHDRRMYTYDRFMGSNLKLKDSESPSSSIDSITNRVDQILDDVDVGECEIPWEDLFLGERIGIGSYGEVYQADMNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNIVLFMGAVTRPPNLSIISEYLPRGSLYRLLHRPYCQIDEKRRIKMALDVARGMNCLHTSTPIIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWTGMNPMQVVGAVGFQNRRLEIPKEVDPLVGRIIWECWQQDPNLRPSFAQLTVALKPLQRLVIPSHQDQVAPYVPQEISVNSTP* 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1898 967 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Pvu7g1898 967 ProSitePatterns Protein kinases ATP-binding region signature. 692 714 IPR017441 GO:0005524
Pvu7g1898 967 PRINTS Tyrosine kinase catalytic domain signature 760 773 IPR001245 GO:0004672|GO:0006468
Pvu7g1898 967 PRINTS Tyrosine kinase catalytic domain signature 799 817 IPR001245 GO:0004672|GO:0006468
Pvu7g1898 967 PRINTS Tyrosine kinase catalytic domain signature 846 856 IPR001245 GO:0004672|GO:0006468
Pvu7g1898 967 PRINTS Tyrosine kinase catalytic domain signature 865 887 IPR001245 GO:0004672|GO:0006468
Pvu7g1898 967 PRINTS Tyrosine kinase catalytic domain signature 909 931 IPR001245 GO:0004672|GO:0006468
Pvu7g1898 967 Gene3D Transferase(Phosphotransferase) domain 1 765 947 - -
Pvu7g1898 967 Pfam Ethylene-responsive protein kinase Le-CTR1 143 336 - -
Pvu7g1898 967 MobiDBLite consensus disorder prediction 406 433 - -
Pvu7g1898 967 SUPERFAMILY Protein kinase-like (PK-like) 670 934 IPR011009 -
Pvu7g1898 967 MobiDBLite consensus disorder prediction 1 30 - -
Pvu7g1898 967 MobiDBLite consensus disorder prediction 413 433 - -
Pvu7g1898 967 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 80 956 - -
Pvu7g1898 967 Gene3D Phosphorylase Kinase; domain 1 679 763 - -
Pvu7g1898 967 SMART serkin_6 686 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1898 967 ProSiteProfiles Protein kinase domain profile. 686 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1898 967 MobiDBLite consensus disorder prediction 31 69 - -
Pvu7g1898 967 Pfam Protein tyrosine and serine/threonine kinase 688 936 IPR001245 GO:0004672|GO:0006468
Pvu7g1898 967 CDD STKc_MAP3K-like 692 935 - -
Pvu7g1898 967 MobiDBLite consensus disorder prediction 504 518 - -
Pvu7g1898 967 MobiDBLite consensus disorder prediction 497 544 - -
Pvu7g1898 967 MobiDBLite consensus disorder prediction 1 69 - -
Pvu7g1898 967 MobiDBLite consensus disorder prediction 356 389 - -
Pvu7g1898 967 PANTHER SERINE-THREONINE PROTEIN KINASE 80 956 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1898 Pvu-Chr7 42072612 42081920 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1898 17 922 MAP Kinase Kinase Kinase AT1G08720 55.851 0.0 911
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pvu7g1898 PK_Tyr_Ser-Thr 1.3e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1898 - - gmx:100818780 1659.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1898 7 42072612 42081920 Pvu7g1898 7 42072612 42081920 ECH
Pvu7g1898 7 42072612 42081920 Pvu1g1743 1 42987726 42989912 PCT