Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1894 ATGGGGTGTGTGATTGGGAGAGAAGTGTCATCGGGAATAATCTCCGAGGCGAAGGAGGAGAAGAGTGTGAGTGTTGAATCCAACAAGAAAATTGATGATGTGTCCTCAAGCAGAGCTGAGGAGAACGTGGTAGAGGCTCTGAATGGTGAGAAGGAGAAGGAGAAAGAGAAGGGAAGGGAAGGGAGTGGTGGTGCCGATGAAGTCCGGGGGCCAAAAGGTGACAGAAGAAGATCAAAGCCAAATCCAAGGCTAAGTAATCCACCGAAGCATTTGCAGGGGGAGCAAGTAGCAGCTGGGTGGCCACCTTGGCTAACAGCAGTGTGTGGTGAAGCCCTTAGCGGGTGGATTCCGCGAAAGGCTGACACATTTGAGAAAATTGATAAGATTGGTCAAGGAACTTATAGTAATGTATACAAAGCTAAAGACACTTTGACGGGTAAGATTGTTGCACTGAAGAAGGTTCGATTTGACAATTTGGAACCTGAGAGTGTAAAATTCATGGCCAGAGAGATTCTTATTTTACGAAGATTGGATCATCCCAATGTTATAAAGCTAGAAGGTTTAGTTACATCCAGAATGTCCTTGAGTTTGTACCTGGTGTTTGATTACATGGTGCATGATTTAGCTGGACTTGCTGCAAGCCCTGACATAAAATTTACAGAGCCCCAGGTTAAATGTTACACGCATCAACTGCTATCAGGACTTGAGCACTGTCATAGTCGAAACATACTTCACCGTGATATTAAAGGATCAAATCTTCTTATTAACAATGAAGGGATACTTAAAATTGCTGACTTCGGCCTTGCGTCTTTCTTTGATCCAAACTGCAGCCATCCCATGACTAATCGTGTAGTTACCCTTTGGTACCGCCCTCTTGAGTTACTTCTTGGTGCCACAGAATATGGTGTGGCCATCGATCTTTGGAGTGTTGGTTGCATTTTAGGAGAGTTATTGGCTGGGAAACCTATTCTTCCTGGACGTACAGAGGTGGAACAACTGCATAAGATATACAAACTTTGTGGATCACCTTCTGATGAGTACTGGAAGAAGTCAAAGATGCCTAATGCTACCTTGTTTAAACCTCGAGATCCATACAAGAGGTGTATAAAAGAGACATTTAAAGATTTTCCACCTTCAGCTCTGCCCCTTATTGAGACTCTTCTTGCAATTGATCCAGCAGAACGAAAGTGTGCCTCAGAAGCTCTAAGAAGTGAGTTCTTTACCACAGAACCTTATGCCTGTGATCCTCTTAGTCTTCCAAAATATCCCCCAACAAAGGAAATGGATGCTAAACGACGGGATGATGAAGCAAGGAGATCAAGAGCTGCAGGCAAAGCTCATGTTGATGGTGCAAAGAAGCATCGGTTGCGTGATCGGTCTGCCAAAGGTGCTCCTGCTCTTGAAGCCAATGCTGAGCTTCAATCCAACGTTGATAGAAGGCGTTTAATCACTCATGCAAATGCTAAGAGCAAGAGTGAAAAGTTCCCTCCACCTCATGAAGATGGACAACTTGGCTTTCCTTTGGGATCTTCTAATCACATTGATCCAGATATTGTTCCTTCTGACATCTCTTTGGGTTCAACCTCCTACACCTTTTCAAAGGAACCATTCCAAGCTTGGTCAGGTCCCATTGGTAATCCTGCCAGCATTAGTAAGCGGAAGAAACAAACTGCAGGTGATGCATTGGATTTATCAAAACAATATAAGGGAACCCTCAAGGATAAAGTTAAAGGAAAGAAAATCACAGCCTAG 1752 0.4389 MGCVIGREVSSGIISEAKEEKSVSVESNKKIDDVSSSRAEENVVEALNGEKEKEKEKGREGSGGADEVRGPKGDRRRSKPNPRLSNPPKHLQGEQVAAGWPPWLTAVCGEALSGWIPRKADTFEKIDKIGQGTYSNVYKAKDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSLSLYLVFDYMVHDLAGLAASPDIKFTEPQVKCYTHQLLSGLEHCHSRNILHRDIKGSNLLINNEGILKIADFGLASFFDPNCSHPMTNRVVTLWYRPLELLLGATEYGVAIDLWSVGCILGELLAGKPILPGRTEVEQLHKIYKLCGSPSDEYWKKSKMPNATLFKPRDPYKRCIKETFKDFPPSALPLIETLLAIDPAERKCASEALRSEFFTTEPYACDPLSLPKYPPTKEMDAKRRDDEARRSRAAGKAHVDGAKKHRLRDRSAKGAPALEANAELQSNVDRRRLITHANAKSKSEKFPPPHEDGQLGFPLGSSNHIDPDIVPSDISLGSTSYTFSKEPFQAWSGPIGNPASISKRKKQTAGDALDLSKQYKGTLKDKVKGKKITA* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1894 583 Coils Coil 37 57 - -
Pvu7g1894 583 Pfam Protein kinase domain 123 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1894 583 CDD STKc_CDK9_like 123 407 - -
Pvu7g1894 583 MobiDBLite consensus disorder prediction 474 498 - -
Pvu7g1894 583 MobiDBLite consensus disorder prediction 1 95 - -
Pvu7g1894 583 MobiDBLite consensus disorder prediction 425 462 - -
Pvu7g1894 583 Gene3D Transferase(Phosphotransferase) domain 1 206 447 - -
Pvu7g1894 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Pvu7g1894 583 ProSitePatterns Protein kinases ATP-binding region signature. 129 152 IPR017441 GO:0005524
Pvu7g1894 583 MobiDBLite consensus disorder prediction 536 563 - -
Pvu7g1894 583 MobiDBLite consensus disorder prediction 13 81 - -
Pvu7g1894 583 PANTHER OS01G0367700 PROTEIN 49 555 - -
Pvu7g1894 583 MobiDBLite consensus disorder prediction 418 507 - -
Pvu7g1894 583 ProSiteProfiles Protein kinase domain profile. 123 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1894 583 Gene3D Phosphorylase Kinase; domain 1 110 205 - -
Pvu7g1894 583 SUPERFAMILY Protein kinase-like (PK-like) 118 413 IPR011009 -
Pvu7g1894 583 SMART serkin_6 123 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1894 583 PANTHER CELL DIVISION PROTEIN KINASE 49 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1894 Pvu-Chr7 42039310 42047612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1894 115 445 Core Cell Cycle Gene Families AT5G10270 52.450 2.27e-118 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pvu7g1894 Pkinase 2.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1894 K08819 - gmx:100817289 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1020 6 21498293 21503090 Pvu7g1894 7 42039310 42047612 PCT