Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1889 ATGGAGTGCAACAAGGATGAGGCTTTGAGGGCTAGAAAAATTGCTGAAGCTAGAATGCAAAGAGGTGAATTTCAAGAGGCTCTCAAGTTTGCTACCAAGGCCAAAAACCTTTATCCTGATGTGGGAAGCATTAGCCACGTTCTTGCGATTTGTGAGGTTCACAATGCTGCAAAGAGGAAACTCTCTCCCTCTGACATGGACTGGTATGCGATTCTTCAGATTGAGAGATTGGCGGATGAAACAGCCATAAAGAAACAGTACAGAAGGCTTGCACTCCTACTTCATCCTGATAAGAATAAGTTTTCTGGTGCAGAAACTGCTTTCAAATTGGTTGGGCAAGCCAATGGGGTTTTGAGTGACCAAGCAAAACGTTCTTTGTATGACAAGAAGTTTGCAGTCTCGGTGAGTTGCCCTGTGCCGAAATCCACCGATTCTAAGAAGAAACCTGGACAGAAGACATTCTGGACATGTTGCCAACATTGTAATACTAAGTACCAGTTCTGCATGCCATTTGTAAATGCAACCATACGCTGTAAGCAGTGTTTGAAATCCTTTAAAGCTTGTGCTATTCCTTTGGTAAATATCCAGAAGGAGTCTCCAACGCATGGTCCCCCAAAACCTGCCTCTGAAAGTACTGGTAGCAAACCCCCTGGTGGAGGAGAACATGCTAGTACGTTTATGAAAAAATGTTCTTCTGGCGTTGGTGGTCATTCTGAAGGTGCTCCTGCATCCACAGGTGCGGAGTCACAAACATCTAAAAATGTTGGAAGTAAAAGAGTTAGGCAGTCAGCACCAGATTCTGGAGAAAGTTTCAAAGCTGGTAAATGGTTATGA 834 0.4388 MECNKDEALRARKIAEARMQRGEFQEALKFATKAKNLYPDVGSISHVLAICEVHNAAKRKLSPSDMDWYAILQIERLADETAIKKQYRRLALLLHPDKNKFSGAETAFKLVGQANGVLSDQAKRSLYDKKFAVSVSCPVPKSTDSKKKPGQKTFWTCCQHCNTKYQFCMPFVNATIRCKQCLKSFKACAIPLVNIQKESPTHGPPKPASESTGSKPPGGGEHASTFMKKCSSGVGGHSEGAPASTGAESQTSKNVGSKRVRQSAPDSGESFKAGKWL* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1889 277 MobiDBLite consensus disorder prediction 243 264 - -
Pvu7g1889 277 PANTHER - 1 274 - -
Pvu7g1889 277 SMART dnaj_3 66 123 IPR001623 -
Pvu7g1889 277 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pvu7g1889 277 MobiDBLite consensus disorder prediction 197 277 - -
Pvu7g1889 277 Gene3D DnaJ domain 52 143 IPR036869 -
Pvu7g1889 277 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pvu7g1889 277 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pvu7g1889 277 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pvu7g1889 277 Pfam DnaJ domain 67 128 IPR001623 -
Pvu7g1889 277 CDD DnaJ 67 120 IPR001623 -
Pvu7g1889 277 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 274 - -
Pvu7g1889 277 SUPERFAMILY Chaperone J-domain 62 131 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1889 Pvu-Chr7 41978174 41979621 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1889 4 191 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.010 9.28e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1889 - - pvu:PHAVU_007G183700g 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1889 7 41978174 41979621 Pvu7g1889 7 41978174 41979621 ECH
Pvu6g1007 6 21391700 21396527 Pvu7g1889 7 41978174 41979621 PCT