Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1882 ATGGTGGGTTCTACTCCAACCTTTGTTCGTCGTAAGGACGATGAAAAAGACAATCTGAATAAACCGAAAAGGGTTTCACTTGGTGAAGCTTTACATCTTAAACCCAAAGAAGAACATTTGTCTTGCTCATCTTCTGCTCATGACTTGAGGCATTTAGAAGAGGAGAAAGAGAAAGAAAATATTGCATCACCAAGAGGAACCTTAGAAGTATGCATGAATGACTTTGACTTTGACTCTCCACCATTAGCTAAACGGGAAGCCAGTTGTTCAAGCACAAGGGCACACAATAACTGGAGTAATTTTTTCAAACTTCTGAAAAAGAAATCTTTTAAGCGGCTAGGGTCCCTCACCCATTTTATTTCTCCAAAGATACCAAAGTGGAAAAGCAGAAGTAGTAGAGAAAGTCATGTTTTAAGTAAGCTATACAACTTCAACTCTTCGTGGGTCACTTTCAACCCTTCTGACCTCAGAAAAGCGACCCACAATTTTGACAGTGAAAATATAATTGGAAGAGGTGGTTTTGCTGATGTTTACAAGGGGTGTCTCCAAGATGGACAGTTAATAGCTGTGAAGAAATTGAATAAAGGAACCACAGAGGAAAAAACCGCGGGCTTTCTATCTGAGCTAGGTGTAATCGCTCATGTTGACCACCGTAATACTGCCAAGCTAGTTGGATGTTGTGTAGAAGGAGAAATGCAGCTTGTCTTTGAGCTATCTACACTAGGAAGTTTAGGATCTCTTCTTCATGGTTCAGATAAAAACAAATTAGATTGGAGTAAAAGGTATAAAATTGCTCTGGGAATAGCTGATGGTCTCCTCTATCTGCATGAGAGTTGTCACAGACGAATCATTCACAGAGATATTAAGGCAGAGAATATTCTACTCACGGAGAATTTTGAGCCACAGATATGTGATTTTGGGCTTGCAAAGTGGTTACCCGAACAATGGACTCACTATAATGTATCAAAATTTGAAGGCACATTTGGTTATTTTGCCCCTGAATATTTCATGCACGGAATAGTAGATGAAAAAACTGATGTTTATTCATTTGGGGTCCTACTTTTGGAGATCATAACGGGGAGACCAGCCGTGGATCATTTGCAGCAAAATATTGTGATATGGGCAAAACCTTTGCTTAACGGCAATCATATCAAGGACCTTATTGATCCTTCTCTAGGTGATGATTATGATCGAGGACAGTTGGGTTGTTTAGTTATAACTGCATCACTTTGTATTGAACAAACTCCTCTCTTACGCCCCAGAATGAGGCAGATTGTCACACTACTAAGAGGTGATAAGCACCTTATGCAATTTCCAAGAGCAAGGGGAAATAGACCTCTCGAAAGAACATACTCAGAAGAGCTGTTAGATGCGCACGAATACAACTCAACAAAATATCTAACACAACTCAAGCGGCATCAAGAAATTGCATTGGGTATGGAGAGCTAA 1449 0.3989 MVGSTPTFVRRKDDEKDNLNKPKRVSLGEALHLKPKEEHLSCSSSAHDLRHLEEEKEKENIASPRGTLEVCMNDFDFDSPPLAKREASCSSTRAHNNWSNFFKLLKKKSFKRLGSLTHFISPKIPKWKSRSSRESHVLSKLYNFNSSWVTFNPSDLRKATHNFDSENIIGRGGFADVYKGCLQDGQLIAVKKLNKGTTEEKTAGFLSELGVIAHVDHRNTAKLVGCCVEGEMQLVFELSTLGSLGSLLHGSDKNKLDWSKRYKIALGIADGLLYLHESCHRRIIHRDIKAENILLTENFEPQICDFGLAKWLPEQWTHYNVSKFEGTFGYFAPEYFMHGIVDEKTDVYSFGVLLLEIITGRPAVDHLQQNIVIWAKPLLNGNHIKDLIDPSLGDDYDRGQLGCLVITASLCIEQTPLLRPRMRQIVTLLRGDKHLMQFPRARGNRPLERTYSEELLDAHEYNSTKYLTQLKRHQEIALGMES* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1882 482 PANTHER OS08G0249100 PROTEIN 41 475 - -
Pvu7g1882 482 ProSitePatterns Protein kinases ATP-binding region signature. 169 192 IPR017441 GO:0005524
Pvu7g1882 482 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 41 475 - -
Pvu7g1882 482 SMART serkin_6 163 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1882 482 Gene3D Transferase(Phosphotransferase) domain 1 240 441 - -
Pvu7g1882 482 MobiDBLite consensus disorder prediction 1 30 - -
Pvu7g1882 482 SUPERFAMILY Protein kinase-like (PK-like) 142 429 IPR011009 -
Pvu7g1882 482 Gene3D Phosphorylase Kinase; domain 1 125 237 - -
Pvu7g1882 482 Pfam Protein tyrosine and serine/threonine kinase 166 372 IPR001245 GO:0004672|GO:0006468
Pvu7g1882 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 283 295 IPR008271 GO:0004672|GO:0006468
Pvu7g1882 482 MobiDBLite consensus disorder prediction 8 30 - -
Pvu7g1882 482 ProSiteProfiles Protein kinase domain profile. 163 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1882 Pvu-Chr7 41919399 41922529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1882 150 435 Receptor kinase-like Gene Family AT1G53420 43.345 3.35e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pvu7g1882 PK_Tyr_Ser-Thr 3.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1882 - - gmx:100781529 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0999 6 21347935 21352854 Pvu7g1882 7 41919399 41922529 PCT