Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1873 ATGCTCGCAATGGCTTTGTTACTGCCACCACTCCATCTTTCAACTCCCTATCTCAGCACCAGCACCATTGTGGCTCTCTGTGTATTCTTCACTCTCCTAGGCACTTGTGTCATCATTGGCCATCTTCTGGAAGAGAATCGGTGGGCTAATGAATCCATCATTGCCCTCCTTCTGGGTTTGTGTTCTGGAACGGTGGTTTTGTTTGTGACTAACTTTCAAAGTGCCAAGATTTTAATATTCAGTGAAGACTTGTTCTTTCTTTACTTGCTTCCGCCGATCATTTTCAATGCCGGTTTCCAAGTCAAGAAGAAACAGTTCTTCAAGAATTTCACTATTATACTGCTCTTTGGAGTCATTGGAACAGTTATTTCATTCTGTCTGATATCTGTTGGTGCCCTTCTGCTCATTCAGTGGATTGGAATAGCTAACCTTGACATAAAAGATTATCTAGCCATCGGTGCCATATTGTCAGCAACGGACTCAGTTTGTACATTGCAGGTTCTCAATCAAGATGAAACACCCTTGCTTTACAGCATTGTATTTGGGGAGGGAGTAGTAAATGATGCCACGTCTATTGTGCTTTTCAATTCGGTCCAATCCCTTGACTTCAGCAGCACCACTTCTATGACAGCCTTGAAATTGTTGGGGACCTTTCTTTTCCTCTTCTGCTCTAGTACTGCCCTTGGCATAGTAGTTGGCCTTTTAAGTGCTTATATTATGAAAACACTCTACCTAGGAAGGCATTCTACTGATCGTGAACTTGCACTTATGATGTTGTTGGCATATTTGTCATATATGATCGCTGAGCTTTTGAATCTCAGTGGGATATTGACTATTTTCTTCTGTGGCATTGTTATGTCACACTACACTTGGCACAATGTTTCATTAAGCTCAAGGACAACAACCAAGCACGCCTTTGCAACCCTCTCATTCATTGCTGAAACCTTTATATTTATATGTGTTGGCATGGATGCTCTAGACATTGACAAATGGAAATCCAGCGAAGCCAGTACAGGAATTTCATTTGCTGTGAGTTCAACTTTGTTTGCATTAGTGTTGATTGGAAGAGCAGCTTTTGTGTTCCCTATTGCATATATTAAGAATCGCATCAATACTAGAGAGAGTACCAAAATTGAATTTCGTTCACAGTTTATCATATGGTGGGCTGGCCTGATGAGAGGTGCAGTGACTATTGCCCTATCTTATAACCAGTTTGCAGAAGCCAAGAGTACATCATCAACTCAAGACTCTGCATTAATGATCACTTCTTCTATAATTGTGGTCTTGTTCAGCACTGTGGTATTTGGCTCCATTACTAAGCCGCTGATAGAGGCTGTGCAACCAAGGCATCCAAAACCAACCAGTTTTGATTCTACTGATAACGTGGAAGATTTGAGATTACTATTGCTTGAAAACAATGGTCCCATTAACCAAAGCAACAATCAGCCATTTCAAAGGGAAAGTAGGATAAGTATGCTAATAAGCCATCCAAGCATAACTGTTCACTACTTTTGGAGAAAATTTGATGTCAAGTTTATGAGGCCTGTGTTTGGTGGAAGGGGTTTTGTGCCATTTGTTCCTGTCGAAGCAGCGGAGAATTTTTGA 1605 0.4106 MLAMALLLPPLHLSTPYLSTSTIVALCVFFTLLGTCVIIGHLLEENRWANESIIALLLGLCSGTVVLFVTNFQSAKILIFSEDLFFLYLLPPIIFNAGFQVKKKQFFKNFTIILLFGVIGTVISFCLISVGALLLIQWIGIANLDIKDYLAIGAILSATDSVCTLQVLNQDETPLLYSIVFGEGVVNDATSIVLFNSVQSLDFSSTTSMTALKLLGTFLFLFCSSTALGIVVGLLSAYIMKTLYLGRHSTDRELALMMLLAYLSYMIAELLNLSGILTIFFCGIVMSHYTWHNVSLSSRTTTKHAFATLSFIAETFIFICVGMDALDIDKWKSSEASTGISFAVSSTLFALVLIGRAAFVFPIAYIKNRINTRESTKIEFRSQFIIWWAGLMRGAVTIALSYNQFAEAKSTSSTQDSALMITSSIIVVLFSTVVFGSITKPLIEAVQPRHPKPTSFDSTDNVEDLRLLLLENNGPINQSNNQPFQRESRISMLISHPSITVHYFWRKFDVKFMRPVFGGRGFVPFVPVEAAENF* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1873 534 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 26 449 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu7g1873 534 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu7g1873 534 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu7g1873 534 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu7g1873 534 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu7g1873 534 PANTHER SODIUM/HYDROGEN EXCHANGER 12 529 - -
Pvu7g1873 534 Pfam Sodium/hydrogen exchanger family 33 444 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Pvu7g1873 534 Gene3D - 145 197 - -
Pvu7g1873 534 PANTHER SODIUM/HYDROGEN EXCHANGER 12 529 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1873 Pvu-Chr7 41878771 41884790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1873 16 532 Antiporters AT5G27150 60.653 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1873 K14724 - qsu:112009828 761.525