Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1869 ATGAGCCAAATGAAGAACACAAATGGCTCTAATAAAAATGGAGGAATTTACTTTTTTCTCCTCCTCCTCCTCATTGTTCCTCTTGCGGCTGCACAATCTTCTGACAATAACCAGAACACATCGTATTACAACCGCTTCAGCCCTTCCATGGCCATCATAATCGTCATCCTCATCGCTGCGGTCTTCCTCATGGGCTTCTTCTCCATCTACATCCGCCACTGCGCCGACTCCCCCTCCGCCAGCATCCGCAACCTCACCGGAGCCGCCGCCCGCCCGGGCCGCGGCCTCGACCAGGCGGTCATCGACGCCTTCCCCACGCTGGAGTACTCCGTGGTGAAGATCCACAAGCTCGGAAAGGGAACGCTGGAATGCGCGGTGTGCTTAAACGAGTTCGAGGACACCGAAACGTTGCGTTTGATCCCCAAGTGCGATCACGTGTTCCACCCTGAGTGCATCGACGAGTGGCTCGCCTCCCACACCACCTGCCCCGTCTGCCGGGCCAACCTCGTCCCTGAGCCCGGAGACTCCGTCAGAGGAATTCCAGTTCTCGACGCTCCTCATGACATCGAGGCCCAATCCGAAGCCCAGCCCGAGGCCCACAACGACGCCGTCGGGCCTTTTCCCGAACAAGAGCGAGAGCCTAAGCTTCCAATCTCCTCCGAACCCCCTCAAGTAGTCAGCCTAAACCAGACGCTCAACCGGAACCGCACGAGAGGCTCTCGCTCGGGCCGCCCCCGCCGCTTCCCGCGCTCTCACTCGACCGGTCATTCGCTGGTCCAGCCCGGCGAGGACACTGAACGGTTCACCTTGAGGCTCCCCGAGGAAGTTAGAAAACAGATACTTCTCAACCCGGAACTGCATCGAGCGAGAAGCTTGGTTATGCTGCCCAGGCAAGGTAGTTCGCGGCGTGGATATCGAACCGGCGAGGGAAGTAGCAGAGGGAGGTCTTCGAGGCGGTTGGACCGGGGGTTTAAGTCCGACCGCTGGGTTTTCACTATGGCGCCGCCATTCTTAGTGAGGGCCTCTTCTGTTAGGTCGCCAAGGGTGGCCAACAATGGCGGCGCAGGAACATCTGCTTCTACTCCCTTTCCGCCGCCGGCTGCTGTGGAATCTGTTTGA 1119 0.5907 MSQMKNTNGSNKNGGIYFFLLLLLIVPLAAAQSSDNNQNTSYYNRFSPSMAIIIVILIAAVFLMGFFSIYIRHCADSPSASIRNLTGAAARPGRGLDQAVIDAFPTLEYSVVKIHKLGKGTLECAVCLNEFEDTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPEPGDSVRGIPVLDAPHDIEAQSEAQPEAHNDAVGPFPEQEREPKLPISSEPPQVVSLNQTLNRNRTRGSRSGRPRRFPRSHSTGHSLVQPGEDTERFTLRLPEEVRKQILLNPELHRARSLVMLPRQGSSRRGYRTGEGSSRGRSSRRLDRGFKSDRWVFTMAPPFLVRASSVRSPRVANNGGAGTSASTPFPPPAAVESV* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1869 372 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 171 IPR013083 -
Pvu7g1869 372 SMART ring_2 124 165 IPR001841 -
Pvu7g1869 372 MobiDBLite consensus disorder prediction 222 238 - -
Pvu7g1869 372 MobiDBLite consensus disorder prediction 343 372 - -
Pvu7g1869 372 PANTHER RING FINGER DOMAIN-CONTAINING 17 318 - -
Pvu7g1869 372 ProSiteProfiles Zinc finger RING-type profile. 124 166 IPR001841 -
Pvu7g1869 372 CDD RING-H2_EL5_like 123 166 - -
Pvu7g1869 372 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 17 318 - -
Pvu7g1869 372 MobiDBLite consensus disorder prediction 295 320 - -
Pvu7g1869 372 MobiDBLite consensus disorder prediction 345 359 - -
Pvu7g1869 372 SUPERFAMILY RING/U-box 117 172 - -
Pvu7g1869 372 Pfam Ring finger domain 123 166 IPR001841 -
Pvu7g1869 372 MobiDBLite consensus disorder prediction 193 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1869 Pvu-Chr7 41818676 41820438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1869 19 359 Rapid Response to Elicitors AT3G05200 47.592 6.67e-95 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1869 K10664 - gmx:100810865 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1869 7 41818676 41820438 Pvu7g1869 7 41818676 41820438 ECH
Pvu6g0980 6 21163270 21165746 Pvu7g1869 7 41818676 41820438 PCT