Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1867 ATGGAAGTTAATACTACTACTACTACAACCACTCTACCTGCAGGGCCACCAACTAAGTACCATTCTTTCACTCATCACCGCTTACATTCAGAAAGACATAGCCATAGCCACGGCCATTTCCCCTCCAAAACCATTCTCATAATCATCTCATTGGTTACCTTAGTCACGCTCCTATTTGTCATTTTTTTGGTCCTATTCTTGATGCGTCGCCAAAAATCTTCCACCAAGAATGGAACTTGCAAAGAAGACAGCAGAGAGCTTCATGACACAAGCAGCAGGCTCATTACTTCATCCACGTTGAATTCTAGTCCAGAAATGAAGAGTGGTTGTCTTCACGGGGGAAATTTGAGCAGGACCCCAGCAGCTGCATTTCGAGGAGTCCAAGTGTTCACATATAGGGAATTAGAAAATGCTACAGGTGGATTCAGTGAAAGAAATGTGATTGGTAGTATTGGAGGGCTTGGTTTGATGTTTAGAGGAGTTCTAAGTGATGGCACTTTGGCAGCAATTAAGTCGCTTCGCAGTGAGGGTAAGCAAGGGGAGCGTGCCTTCAGAATAGAGGTCGATCTCCTTAGTCGCTTGCACTCTCCATATTTGGTGGAGTTACTTGGCTATTGCGCTGACCAACACCACAGGTTATTGATTTTCGAATACATGCCCAATGGTACACTTCACCACCATCTTCACTCCCCCAACGATCAAACTCAACCGTTGGATTGGTGGGCCCGGATGAGGATAGCCCTTGATTGTGCCAGGGCACTGGAATTCCTTCATGAACATGCAGTCTCTCCTGTGATCCACAGAGACTTCAAGAGTAACAACGTTCTACTGGATCAAAATTTCCGTGCCAAGGTGTCTGATTTTGGATTGGCTAAGATGGGATCAGAGAAGAGGAACGGTCAGGTTTCCACCCGTGTGTTGGGGACCACTGGATATTTGGCACCAGAGTACGCCACGGGTAAGCTTACCACAAAGTCAGATGTTTACAGCTATGGTGTGGTTCTTCTCGAACTCCTCACGGGACGTGTACCTGTTGATATCAAGCGGGCCCCGGGAGAACACGTCCTTGTCTCTTGGGCTCTTCCAAGGTTGACAAACAGAGAAAAGGTGATTGAAATGGTTGACCCAGCTCTACGCGGACAGTACTCGAAGAAGGATTTAATTCAGATAGCTGCCATTGCAGCAATGTGCATACAGCCAGAAGCTGATTACAGGCCGCTCATGACAGATGTTGTACAATCACTGATACCGCTTGTTAGGAACCCATCCTCCCTTAGCTCTATCTCCCTACGATTTCAGAAACAAACGCCTAGTCCAAGTCATTAG 1326 0.4676 MEVNTTTTTTTLPAGPPTKYHSFTHHRLHSERHSHSHGHFPSKTILIIISLVTLVTLLFVIFLVLFLMRRQKSSTKNGTCKEDSRELHDTSSRLITSSTLNSSPEMKSGCLHGGNLSRTPAAAFRGVQVFTYRELENATGGFSERNVIGSIGGLGLMFRGVLSDGTLAAIKSLRSEGKQGERAFRIEVDLLSRLHSPYLVELLGYCADQHHRLLIFEYMPNGTLHHHLHSPNDQTQPLDWWARMRIALDCARALEFLHEHAVSPVIHRDFKSNNVLLDQNFRAKVSDFGLAKMGSEKRNGQVSTRVLGTTGYLAPEYATGKLTTKSDVYSYGVVLLELLTGRVPVDIKRAPGEHVLVSWALPRLTNREKVIEMVDPALRGQYSKKDLIQIAAIAAMCIQPEADYRPLMTDVVQSLIPLVRNPSSLSSISLRFQKQTPSPSH* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1867 441 Pfam Protein tyrosine and serine/threonine kinase 164 415 IPR001245 GO:0004672|GO:0006468
Pvu7g1867 441 MobiDBLite consensus disorder prediction 1 22 - -
Pvu7g1867 441 MobiDBLite consensus disorder prediction 1 17 - -
Pvu7g1867 441 Gene3D Transferase(Phosphotransferase) domain 1 219 428 - -
Pvu7g1867 441 MobiDBLite consensus disorder prediction 75 106 - -
Pvu7g1867 441 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 3 439 - -
Pvu7g1867 441 PANTHER OS01G0750732 PROTEIN 3 439 - -
Pvu7g1867 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Pvu7g1867 441 Gene3D Phosphorylase Kinase; domain 1 115 218 - -
Pvu7g1867 441 CDD STKc_IRAK 148 418 - -
Pvu7g1867 441 SUPERFAMILY Protein kinase-like (PK-like) 124 415 IPR011009 -
Pvu7g1867 441 MobiDBLite consensus disorder prediction 75 90 - -
Pvu7g1867 441 MobiDBLite consensus disorder prediction 91 106 - -
Pvu7g1867 441 ProSiteProfiles Protein kinase domain profile. 143 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1867 Pvu-Chr7 41804381 41807840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1867 110 429 Receptor kinase-like Gene Family AT3G58690 63.272 4.23e-150 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pvu7g1867 PK_Tyr_Ser-Thr 4.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1867 - - gmx:100499645 735.717