Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1841 GCAGATCTACTACTGTCATATGGGTATGAAAAGGATATAAAAGCTTTTACACCTCATGTTCCCAGAAGTTGCCAGTGTCTTCTTATGTCTGCAACATCAAGTGCGGATGTTGACAAACTAAAGAAGTTGATTCTGCACAACCCATTTATTTTGACTTTGCCTGAAGTGGGAAATAACAAGGAAGAGATCATTCCTAAAAATGTTCAGCAGTTCTGGATTTCATGTTCTGCCAGTGCTAAGTTACTATACATCCTTGCTGTGTTGAAGTTGGGGTTGGTCCAAAAGAAAGTTCTGATATTCACTAATACCATAGACATGAGTTTCAGATTGAAACTATTCTTGGAAAAGTTTGGGATAAGATCTGCTGTTTTAAATCCTGAGTTGCCTCAGAATTCCCGTCTCCATATTCTGGAGGAATTCAATGCGGGCCTGTTTGATTATCTAATTGCAACAGATCTTAGTCAGTCAAAGGAAAAAGATGAACTGTCTAAGGAAAGTAATGCTGTATCACGGAAGTCTAGAAAACGTGCTAAATTAGATTCTGAATTCGGAGTTGTAAGGGGAATTGACTTTAAAAATGTATTCACGGTTATAAACTTTGAAATGCCTCATAGTGTTGAGGGATATGTACATCGAATTGGACGTACAGGTAGAGCGTACAATTCTGGTGCTTCTGTCTCTCTGGTTTCTCCAGATGAGATGTATACTTTAGAAGAAATAAGATCTTTTGTTGGGGATGATGAAAACAAAGGCACAAGTTCTATTGCTGAGTTTCCCCTCCTCACCAAGAACGCAGTTGAATCTTTACGGTATAGGGCAGAGGATGTTGCCAAAAGTGTAACTAGAATTGCCGTCCGAGAGTCACGAGCCCAAGATTTGAGGAATGAAATTTTGAACTCTGAAAAGTTGAAAGCCCATTTTGAGACTAATCCAAGAGACCTAGATCTACTGAAGCATGACAAAATTTTGAGCAAGAATGAGCCACCTCCGCACCTACGTGATGTGCCTGACTACCTATTAGACAAACCAACGAAAGAGGCAAGGGAAATGGTTAAACTTGCAAGGGATGCAATGGGAAATAATAATAATCGCCGCAAAGGACCCAAGAGAAAATTAAGGAAAGATGGAGACCCTTTGAAGGCTTTGGCATCAAAAAGACCGCACAAAGTTAGGAAGACTGGTGGAAGCGATGGCAACAATAGCAGTGATAGACAAAATCGCAAAAAGAATTAG 1233 0.399 ADLLLSYGYEKDIKAFTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFILTLPEVGNNKEEIIPKNVQQFWISCSASAKLLYILAVLKLGLVQKKVLIFTNTIDMSFRLKLFLEKFGIRSAVLNPELPQNSRLHILEEFNAGLFDYLIATDLSQSKEKDELSKESNAVSRKSRKRAKLDSEFGVVRGIDFKNVFTVINFEMPHSVEGYVHRIGRTGRAYNSGASVSLVSPDEMYTLEEIRSFVGDDENKGTSSIAEFPLLTKNAVESLRYRAEDVAKSVTRIAVRESRAQDLRNEILNSEKLKAHFETNPRDLDLLKHDKILSKNEPPPHLRDVPDYLLDKPTKEAREMVKLARDAMGNNNNRRKGPKRKLRKDGDPLKALASKRPHKVRKTGGSDGNNSSDRQNRKKN* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1841 410 Pfam Helicase conserved C-terminal domain 80 220 IPR001650 -
Pvu7g1841 410 PANTHER RNA HELICASE 1 357 - -
Pvu7g1841 410 MobiDBLite consensus disorder prediction 354 410 - -
Pvu7g1841 410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 245 IPR027417 -
Pvu7g1841 410 PANTHER ATP-DEPENDENT RNA HELICASE DDX56-RELATED 1 357 - -
Pvu7g1841 410 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 86 266 IPR001650 -
Pvu7g1841 410 Gene3D - 57 259 IPR027417 -
Pvu7g1841 410 SMART helicmild6 108 220 IPR001650 -
Pvu7g1841 410 CDD SF2_C_DEAD 68 229 - -
Pvu7g1841 410 Coils Coil 290 310 - -
Pvu7g1841 410 Gene3D - 1 56 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1841 Pvu-Chr7 41581165 41587410 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1841 1 260 Eukaryotic Initiation Factors Gene Family AT3G19760 23.954 3.00e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1841 K14810 - gmx:100800749 703.745