LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu7g1839	ATGGAATATGAAATTTTGGTTTGGTTACTTCTTCTCTTTGCAACTCCCCTTTGCTTCTTAGCCACAAAACTAATTAAATCCAAACCACCACCCTCTCCTCCTTCTTCCACCACCACCACCACCGTTCCCAAAGTCTATCCTATCATCGGTTCCGTGTTGTCCATCATAGCAAACAAGCATCACCGCATTCAGTGGCTCTCCGACATACTCCATGCCTCTCCCTCCTCAACCTTCGTCCTCCACCGTGGCTTCGGCTCCCGCCAACTCTTCACAGCAAACCCTACTGTAGTCCACCACATTCTCAAGACTAACTTCCCACTCTACCACAAGGGCCCAACCATGAAATGCGCCCTTAATGATTTCCTAGGCCAGGGCATTTTCAACACAGATGGCCCCACCTGGAAGCTTCAACGCCAAATCTCCAGCCACGAATTCAGCAATCACACTCTCCGCAAGTTCATCGAAACCGTCGTCGATGTGGAGCTCTCGGACCGCCTTCTGCCCCTCCTCGACGACGCATCCCGGAACAAAACCATCATCCCAGACTTCCAAAACATTCTCCAACGCTTCACCTTGGACAACATCTGCAAAATCGCTTTCGGCTTCGACCCCGAGTGCATCCTCCGGGAAGCCCCCTTCACCACCGCCCTCACCGACGCCACAATAATCTGCAGTAAGAGACTCAACGGCGCCTTCCCTCTGATTTGGAAAACCAAAAAACTCCTTAACCTAGGGTCGGAGAAGCGGCTGAAGGAAGCGATCTCCGAAGTGAAGGATTTGGCAAGGAGAATAATGAGAGAGAAGAAAAAGGAGCTTCGGGAAAAGGAAACCCTAGATTCCATGGATCTGTTGTCACGGTTTTTATGCTCAGGCCACTCGGACGAAGAGTTCGTTATAGATATAATCATCAGCTTTATCGTGGCTGGGAGGGACACAACCTCAATAGCACTCACCTGGTTCTTCTGGCTCCTTTCTAAACACCCGCACGTGGAGGAGGAGATTCTCAAGGAGGTAACGCAGAAAGATACGGTGTACACACACGCGTGTGAGGAAATGAAAGACATGGTTTACACGCATGCGGCGTTGTGCGAGAGCCTGAGGCTTTACCCACCCGTTCCGATGAACTCCAAAGAGGCTATGGGCGATGATGTTTTACCGAACGGAACTTTGGTGAAGAGAGGGTGGAGGGTGACGTATCATATTTACGCCATGGGGAGGTCGGAGAAGATTTGGGGGCCGGATTGGGCGGAGTTTCGGCCGGAGAGGTGGCTGAGTTGGGAGGAGGCGGAAGGGAGGTGGAGGTTTCAGGCCGTGGATGCTTTTACCTATCCCGTGTTTCAGGCTGGCCAAAGGGTCTGTTTGGGTAAGGAAATGTCGTTCTTGCAAATGAAAAGAATGGTGGCCGGGATTTTGAGACGCTTTAAGGTGGTTTCCAACGTGGCGGAACCCGAGTACGGTGGCTACTTCACTTCTTTCATGGTGGGTGGCTTCCCCGTCACGATTCAGAATCGTAATTAG	1518	0.5145	MEYEILVWLLLLFATPLCFLATKLIKSKPPPSPPSSTTTTTVPKVYPIIGSVLSIIANKHHRIQWLSDILHASPSSTFVLHRGFGSRQLFTANPTVVHHILKTNFPLYHKGPTMKCALNDFLGQGIFNTDGPTWKLQRQISSHEFSNHTLRKFIETVVDVELSDRLLPLLDDASRNKTIIPDFQNILQRFTLDNICKIAFGFDPECILREAPFTTALTDATIICSKRLNGAFPLIWKTKKLLNLGSEKRLKEAISEVKDLARRIMREKKKELREKETLDSMDLLSRFLCSGHSDEEFVIDIIISFIVAGRDTTSIALTWFFWLLSKHPHVEEEILKEVTQKDTVYTHACEEMKDMVYTHAALCESLRLYPPVPMNSKEAMGDDVLPNGTLVKRGWRVTYHIYAMGRSEKIWGPDWAEFRPERWLSWEEAEGRWRFQAVDAFTYPVFQAGQRVCLGKEMSFLQMKRMVAGILRRFKVVSNVAEPEYGGYFTSFMVGGFPVTIQNRN*	506

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu7g1839	505	Coils	Coil	247	270	-	-
	Pvu7g1839	505	PRINTS	P450 superfamily signature	308	325	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu7g1839	505	PRINTS	P450 superfamily signature	360	371	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu7g1839	505	PRINTS	P450 superfamily signature	444	453	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu7g1839	505	PRINTS	P450 superfamily signature	453	464	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu7g1839	505	PANTHER	CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE	8	503	-	-
	Pvu7g1839	505	SUPERFAMILY	Cytochrome P450	42	504	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu7g1839	505	Pfam	Cytochrome P450	43	477	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu7g1839	505	PRINTS	E-class P450 group I signature	297	314	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu7g1839	505	PRINTS	E-class P450 group I signature	317	343	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu7g1839	505	PRINTS	E-class P450 group I signature	359	377	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu7g1839	505	PRINTS	E-class P450 group I signature	443	453	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu7g1839	505	PRINTS	E-class P450 group I signature	453	476	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu7g1839	505	Gene3D	Cytochrome P450	35	505	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu7g1839	505	PANTHER	CYTOCHROME P450	8	503	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu7g1839	Pvu-Chr7	41549809	41551601	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu7g1839	4	504	Cytochrome P450	AT5G63450	44.379	6.43e-136	403

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu7g1839	K20769		K20768	gmx:100781020	732.25

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu1g1638	1	41647894	41649841	Pvu7g1839	7	41549809	41551601	PCT