Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1832 ATGACAGACATATTTGAAAACCATCCATCACCTGATTCTTCAAATTATGCATCAAGCAGTGGCTTCTCTGTGGACGATAAGGACATTGGATATAGAGCTGCAACATCAACACATACATATCTTTTGGACAACAAATCTGTCCTCCACTTTTTTTCCATCAAAATTGACCTGAATTATGCTCGCATGGCAATGGCAGAGATGGTGGGTACTTTTATTTTGATGTTCTGTGTATGTGGAATCAGTGCAAGCACACAATTCCAAAAGGGTGCTGTGGGGCTTCCGGAATATGCAGCTACAGCAGGGTTAACAGTGGTGGTGATAATTTTCTCTATAGGGCCAATATCTTGTGCGCACGTTAACCCAGCTGTCACAATAGCCTTTGCAACAATGGGTCAATTTCCATGGTTCAAGGTTCCAGTTTACATAATAGCACAGATAGTAGGTTCTATGTCGGCAACATACATAGGTTGCCTTGTATACGGCATAAAATCAGATGCTATCATGACCATGCCACTCCAAGGGTGCACCTCTGCCTTCTGGGTGGAGCTTATTGCAACTTTCATCATCATGTTCCTTGTTGCAGCTTTGACATCTGAATCTCAATCAGTGGGCCATTTATCTGGCTTTGTTGCTGGTATAGCAATTGGCCTTGCTGTGCTGATCACAGGGCCAGTCTCAGGTGGATCAATGAATCCTGCAAGATCATTAGGTCCAGCAATTCTCTCATGGAAGTTTAAGAACATATGGATATATATGGTGGCTCCCAGTGGTGGAGCAGTGGCAGGAGCGGCAATGTTTCGTTTCTTACGCCTTCGAGACCAACATTCTACTACTTTGTCCTCCCCAAACATCAGTGCTGCTGCTGGTCGTCCCATACCCTTTTGCTCAAGTTAG 894 0.443 MTDIFENHPSPDSSNYASSSGFSVDDKDIGYRAATSTHTYLLDNKSVLHFFSIKIDLNYARMAMAEMVGTFILMFCVCGISASTQFQKGAVGLPEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATMGQFPWFKVPVYIIAQIVGSMSATYIGCLVYGIKSDAIMTMPLQGCTSAFWVELIATFIIMFLVAALTSESQSVGHLSGFVAGIAIGLAVLITGPVSGGSMNPARSLGPAILSWKFKNIWIYMVAPSGGAVAGAAMFRFLRLRDQHSTTLSSPNISAAAGRPIPFCSS* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1832 297 PANTHER AQUAPORIN NIP7-1-RELATED 10 286 - -
Pvu7g1832 297 MobiDBLite consensus disorder prediction 1 20 - -
Pvu7g1832 297 ProSitePatterns MIP family signature. 118 126 IPR022357 -
Pvu7g1832 297 Gene3D Glycerol uptake facilitator protein. 27 281 IPR023271 -
Pvu7g1832 297 PRINTS Major intrinsic protein family signature 61 80 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu7g1832 297 PRINTS Major intrinsic protein family signature 100 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu7g1832 297 PRINTS Major intrinsic protein family signature 137 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu7g1832 297 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu7g1832 297 PRINTS Major intrinsic protein family signature 212 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu7g1832 297 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu7g1832 297 PANTHER AQUAPORIN NIP2-1 10 286 IPR034294 -
Pvu7g1832 297 Pfam Major intrinsic protein 59 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu7g1832 297 SUPERFAMILY Aquaporin-like 57 275 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1832 Pvu-Chr7 41477524 41487596 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1832 64 274 Major Intrinsic Protein MIP AT5G37820 41.038 9.52e-54 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1832 K09874 - mtr:MTR_1g070385 459.529