Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu7g1828 | ATGGAAGAGGTTGAGCAAGCTAATAGAACAGCTGTTGAAAGCTGTCATAGGGTTCTGAGTTTGTTGTCTCAACCAAGGGATCAGGTTCAGCATAGGAATTTAGTGATGGAAACTGGGGATGCTGTGGTAAGGTTCAAGAAGGTTGTGTCCTTGCTTCACAGTGGTTTGGGTCATGCAAGAGTGAGGAAGCTTGAAAACCCTCAAGCCCCCTTTACACATCAAAGTATCTTCTTAGACAACCCAAATTGCAAAACCAACAACCATCACTCAAAAAATCTGCAGCTTTTCCAAGCCAGCTTTCCTGACAATTCACTTCAGGAAATGGGTTCAACCATTAAACATTCACTCTCTCTTGGACAGCCCTCTTTGGAATTGAGCTCTAGTGGGAAAAGTCCTCTTCACCTCACTCAACATGCTTCTTCAGCTCACTATCACTTCTTTCAGCAACAGCATCATCAAAGGGCGTTGCTCCAGCAGCAACAGCAACAGCAGCAGCAGCAACAACAACAACAGCAACAGTTGAAGCATCAAGCGGAAATGATGTTCCGAAGGAGCAATAGTGGCATAAACCTGAATTTTGACAGCACTAGCTGCACACCAACAATGTCATCCAATAGGTCTTTTATTTCTTCCTTGAGCATAGACGGAAGTGTGGCTAACTTGGATGGAGGTGTCTTCCATTTAATAGGAGCTCCGCACTCATCTGATCAGAATTCGCAACAGCACAAGAGAAAATGTTCTGCAAGAGGTGATGAGGGAAGCTTGAAATGTGGGAGCAGTTCTAGATGTCATTGCTCTAAGAAGAGGAAACATAGAGTGAAGAGGCCAATTAAGGTGCCTGCTATCAGCAACAAACTTGCAGATATTCCACCTGATGATTATTCATGGAGAAAGTATGGCCAAAAGCCAATCAAGGGCTCTCCTCACCCTAGGGGATACTACAAATGCAGCAGCATGAGAGGGTGTCCTGCTAGAAAGCATGTTGAGAGGTGTTTGGAAGAGCCGACCATGCTAATTGTCACCTATGAAGGCGAACATAACCACCCTAAGTTACCAACGCAATCTGCAAATGCATGA | 1077 | 0.4475 | MEEVEQANRTAVESCHRVLSLLSQPRDQVQHRNLVMETGDAVVRFKKVVSLLHSGLGHARVRKLENPQAPFTHQSIFLDNPNCKTNNHHSKNLQLFQASFPDNSLQEMGSTIKHSLSLGQPSLELSSSGKSPLHLTQHASSAHYHFFQQQHHQRALLQQQQQQQQQQQQQQQQLKHQAEMMFRRSNSGINLNFDSTSCTPTMSSNRSFISSLSIDGSVANLDGGVFHLIGAPHSSDQNSQQHKRKCSARGDEGSLKCGSSSRCHCSKKRKHRVKRPIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGEHNHPKLPTQSANA* | 359 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu7g1828 | 358 | PANTHER | WRKY DNA-BINDING PROTEIN 21-RELATED | 2 | 357 | - | - | |
Pvu7g1828 | 358 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 2 | 357 | IPR044810 | GO:0003700 | |
Pvu7g1828 | 358 | SUPERFAMILY | WRKY DNA-binding domain | 288 | 350 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu7g1828 | 358 | MobiDBLite | consensus disorder prediction | 232 | 252 | - | - | |
Pvu7g1828 | 358 | Gene3D | WRKY domain | 277 | 352 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu7g1828 | 358 | SMART | WRKY_cls | 290 | 350 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu7g1828 | 358 | MobiDBLite | consensus disorder prediction | 158 | 178 | - | - | |
Pvu7g1828 | 358 | Pfam | WRKY DNA -binding domain | 292 | 349 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu7g1828 | 358 | Pfam | Plant zinc cluster domain | 243 | 288 | IPR018872 | - | |
Pvu7g1828 | 358 | ProSiteProfiles | WRKY domain profile. | 285 | 351 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu7g1828 | 358 | Coils | Coil | 157 | 177 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu7g1828 | Pvu-Chr7 | 41387786 | 41390521 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu7g1828 | 1 | 355 | WRKY Transcription Factor Family | AT2G30590 | 58.747 | 3.93e-126 | 365 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Pvu7g1828 | WRKY | 5.1e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu7g1828 | - | - | pvu:PHAVU_007G177900g | 674.855 |