Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1818 ATGGCCAATCACCCTTCCGAACCTCCCACCGACGACTTCCTCGACCAAATCCTCGGCCTCCCCACCTTCGCCTCCGCCGACCCCGCCGACGCTTCTCCGATGATGCTCCAGCTCAACTCCGGCGACGCCGCCACCCACCTCGCTGCCGGCGCTGCCTTCCACGCGCCGCCCTACCAGCTGGGCCTCAGCTTGGACCAAGGTAAGGGAGGCTTCCTTTCGCCCGAGGATGCTTCTGGAAGCGGCAACCGCTTCCGCGACGACGTCGTTGATACCAGGCCTAAGAACGTTTTTCATGGGCAACCCATGCCAACTACTGTTCCGATTGCTCCACATCCACCAGCAGTGCGACCTAGAGTGCGGGCTAGAAGAGGACAGGCTACAGATCCACACAGTATAGCTGAAAGGTTGCGCAGAGAGAGAATAGCTGAAAGAATCAGGGCTTTACAAGAACTGGTTCCCAGTGTCAACAAGACAGATAGAGCTGCCATGCTGGACGAAATTGTGGATTATGTCAAGTTCTTAAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGATTGGGTGGAGCTGGTGCTGTGGCACCACTAGTAACTGACATCCCATTATCATCGGTCGAGGAAGAAGGCAGTGAGGGAAGAAACCAGCCAGCTTGGGAGAAGTGGTCAAATGATGGCACAGAAAGACAGGTAGCTAAACTTATGGAAGAAAATGTTGGGGCTGCTATGCAATTTCTTCAATCAAAAGCACTCTGCATCATGCCTATCTCACTGGCATCAGCAATATACCAGTCACAACCATCAGACACCTCTAGTATAGTTAAACCTGAAACTAATCCTCCTTCATAG 843 0.5291 MANHPSEPPTDDFLDQILGLPTFASADPADASPMMLQLNSGDAATHLAAGAAFHAPPYQLGLSLDQGKGGFLSPEDASGSGNRFRDDVVDTRPKNVFHGQPMPTTVPIAPHPPAVRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPSDTSSIVKPETNPPS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1818 280 Pfam Helix-loop-helix DNA-binding domain 130 174 IPR011598 GO:0046983
Pvu7g1818 280 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 269 - -
Pvu7g1818 280 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 269 - -
Pvu7g1818 280 Gene3D - 120 182 IPR036638 GO:0046983
Pvu7g1818 280 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 125 174 IPR011598 GO:0046983
Pvu7g1818 280 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 123 184 IPR036638 GO:0046983
Pvu7g1818 280 SMART finulus 131 180 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1818 Pvu-Chr7 41308446 41313336 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1818 53 279 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 80.851 3.30e-117 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pvu7g1818 HLH 1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1818 - - gmx:100793177 473.781