Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1816 ATGGAGAATTCACTGGGAAGCTATGAAAAGGAGCTTAATCTGGAGGCCACAGAGCTGAGACTGGGGTTGCCCGGTACCGATGAGCCTGAGAAACGTGCTATTGCTGCTAGAACCAACAAAAGATCTTCACCTGAAGCAAGTGAAGAAGAGTGCATAAGCAATGTTTCTGATGTCACAAGTGATCACCAAGACAACGTTGTGCCACCTGCAAAGGCACAAGTAGTGGGATGGCCACCGATTCGATCTTACAGGAAGAATAGTCTACAGCAAAAGAAAGAAGAACAAAGTGAAGGGAATGGGATGTACGTGAAAGTTAGCATGGCGGGTGCACCTTATTTGAGGAAGATAGATCTCAGGGTTTACCAAAGCTACCCTCAACTTCTCAAGGCCTTGGAAAATATGTTCAAGTGCATATTTGGAGAATATTCAGAAAGGGAAGGGTACAATGGATCTGAACACGCTCCTACTTATGAAGACAAAGATGGTGACTGGATGCTGGTTGGAGACGTGCCATGGCACATGTTCGTTTCATCCTGCAAGAGGTTGAGAATTATGAAGGGATCAGAAGCACAGGGGTTGGGTTGTTTTTGA 591 0.4552 MENSLGSYEKELNLEATELRLGLPGTDEPEKRAIAARTNKRSSPEASEEECISNVSDVTSDHQDNVVPPAKAQVVGWPPIRSYRKNSLQQKKEEQSEGNGMYVKVSMAGAPYLRKIDLRVYQSYPQLLKALENMFKCIFGEYSEREGYNGSEHAPTYEDKDGDWMLVGDVPWHMFVSSCKRLRIMKGSEAQGLGCF* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1816 196 PANTHER AUXIN-INDUCED PROTEIN 5 194 - -
Pvu7g1816 196 SUPERFAMILY CAD & PB1 domains 95 186 - -
Pvu7g1816 196 Pfam AUX/IAA family 39 194 IPR033389 -
Pvu7g1816 196 Gene3D - 94 196 - -
Pvu7g1816 196 MobiDBLite consensus disorder prediction 22 50 - -
Pvu7g1816 196 MobiDBLite consensus disorder prediction 24 47 - -
Pvu7g1816 196 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 5 194 IPR003311 GO:0005634|GO:0006355
Pvu7g1816 196 ProSiteProfiles PB1 domain profile. 100 187 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1816 Pvu-Chr7 41296938 41298764 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1816 53 193 B3 DNA Binding Superfamily AT2G46530 31.915 1.22e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pvu7g1816 AUX_IAA 1.2e-58 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1816 K14484 - gmx:100780752 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1624 1 41428482 41429980 Pvu7g1816 7 41296938 41298764 PCT