Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1815 ATGGAAGCTGGCCTTATGAAGGAGAAGATGGTGTTTGAGGAAACTGAACTCAGGCTCGGACTTGGACTGCCTGGAAATGGAGCCACGCCAACTGAATCAGAAGGAGTGAGGAAGAGAGGCTTCTCTGAAACTCAGACTGAAACAACCACTGTTGATTTGATGCTTAACCTCTCTCCCAAGGAAGCTGCTTCTGCTCCATCACCAGATCCACGTAATATGCCAAAGACTTCGCCTAAGGACAACACTTTGATTCCTGATCCTGCCAAACCTCCTGCTAAGGAGCAAGTGGTGGGATGGCCACCAGTGAGGTCTTTCCGGAAGAACATGTTTGCAGCACAGAAGAGCATGGTAGAGGAAAGTGAGAAGAACAGCCCTAATGCAAGCTTTGTGAAGGTGAGCATGGATGGAGCACCTTATCTCCGGAAAGTGGACTTGAAGATGTACAAGAGTTACCCAGAGCTCTCAGATGCCTTAGGAAAAATGTTTAGCTCCTTCACCATTGGAAATTGTGAATCCCAAGGCTTTAAGGATTTCATGAATGAGAGCAAGTTGATGGATCTTTTGAACAGCTCCGACTGTGTCCCGACCTATGAAGACAGGGATGGCGACTGGATGCTTGTCGGTGATGTCCCATGGGAGATGTTTGTTGAATCATGCAAGCGTCTACGCATCATGAAAGGAAAGGAAGCTATTGGACTGGCACCAAGAGCCATGGAGAAATGCAAGAACAGGAGCTAG 738 0.4783 MEAGLMKEKMVFEETELRLGLGLPGNGATPTESEGVRKRGFSETQTETTTVDLMLNLSPKEAASAPSPDPRNMPKTSPKDNTLIPDPAKPPAKEQVVGWPPVRSFRKNMFAAQKSMVEESEKNSPNASFVKVSMDGAPYLRKVDLKMYKSYPELSDALGKMFSSFTIGNCESQGFKDFMNESKLMDLLNSSDCVPTYEDRDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1815 245 Pfam AUX/IAA family 15 236 IPR033389 -
Pvu7g1815 245 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 7 238 IPR003311 GO:0005634|GO:0006355
Pvu7g1815 245 PANTHER AUXIN-INDUCED PROTEIN AUX28 7 238 - -
Pvu7g1815 245 MobiDBLite consensus disorder prediction 20 96 - -
Pvu7g1815 245 ProSiteProfiles PB1 domain profile. 127 227 IPR000270 GO:0005515
Pvu7g1815 245 Gene3D - 121 239 - -
Pvu7g1815 245 SUPERFAMILY CAD & PB1 domains 122 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1815 Pvu-Chr7 41268740 41271738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1815 119 230 B3 DNA Binding Superfamily AT3G61830 33.929 2.90e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pvu7g1815 AUX_IAA 3.2e-80 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1815 K14484 - gmx:100780214 408.297