Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1796 ATGATTCCGAAGGCTCTGTCACAGTACCTATCATTCGCGTTAGGGTTTCTGCTTTGCGCCACAATCCCTTTCGTTCACGCCGAGTCGTCCACGTGCTTGACGGTCTACAAGAACGGCGGTGCTCCGGCGGTGTTTCAGTCCCCAAAATGCCCCCGCTGGAAGCTCTCCGACTATGATTCACCTCCCCAAACCACCGCGCGTTGCCAGATTGCGATGCTCCAAGGCCGCAGAAACTCTCAAGAGGATCGCGCTCTCTGCGTCCTCGATGTTCGCATTCCCTTTCCCGGTGAGAACGGGATCAAGGAGGTTGCGGTTGGCATTGTGGCCGTTTTTGACGGTCATAACGGTGCAGAAGCTAGCGAGATGGCGTCGACACTTTTGTTGGAGTATTTTGTTCTGCATACTTATTTTCTCCTCGATTCCGCCTTTTCTGTTATTTCGAAGACGTCAACAGAAACATTGCTTCACAAGAGAGACCGTGATCATGCAAACTTACTGCATAGATGGAAGGAGATTATAGGTTCGGAATGGCATGAACTGCATTTCGAAAGGTTGCAGAATACATTTTCTCCAAATTCTGATGTTTCTTTTCACTTGGAAATTTTGAAGGAAGCGTTATTGAGAGCAGTCCACGACATTGATGCTAAATTTTCTGAGGAGGCCTCTAGAAATAATCTTCACTCTGGATCAACAGCTACCATTGTTTTGGTAGCGGATGATAAAATTTTGGTTGCCAATATTGGAGACTCTAAGGCCATCTTGTGCTCTGAAAATTTTCAGTCTCCCAGAGAGGCTAAAGACTTATTATTAAAGCTATATAGACAGAAAGAGCATGACGGTTCTGTTTCTGTGTGGGATCGTGAAAAGTACAAACTGGCTTCATCCCATGGTCTCACTCATTTTGCTGTAAAGGAATTGACAAGTGATCATCATCCAGACCGAGATGATGAAAGAAATCGGGTGGAAACAGCTGGTGGTCAGGTTCAAAATTGGGGTGGGGTGCCTCGCATAAATGGTCAGCTGGCTATTACACGGGCTATTGGTGATGTACCCTTTAAAAGTTATGGTGTTATATCTGCACCAGAAGTGACTGATTGGCAGCCTCTGACTACTAATGATAGCTATTTGGTGGTAGCATCAGATGGTGTATTTGAGAAGATGAGCTTGCAGGAAGTTTGTGATTTGTTGTGGGATGTGCACCGTTACAGTAACATGAGATCAGAGTGTACCCATTCTTCCTACTCGTTGGCAGATTTAATTGTTAATAATGCCTTCAAAAAGGGCAGTATGGACAATGTGGCAGCCATCGTCATTCCTCTGGATTCTGTCAAATCCTCTGCAAACTCACTTAGGGGAAGTTATATTGGAAAGAGTGATGCAGGTTTCCCTTTATTTGGTTTGCAGGAAACTTCCTTCAAAAGCTCATCAGTTAATGGCATCTCGTCTGATCTTATGCACTTGGAGCACCCTCATCTGGTAGATACCAAGTTTAAGCGAATATTGGTTGAAGTAAAAGATGGTGATTTTGGCTGTTTCTATTTATCCGAAAATCTTGATGAACCAGAGGACTCCAAGCAGATTGCCAAAAAAACTGACTGGGATGACTATTTGTATGAACTACCTCCTCCTCTACCAAATGCCCTTTGTCATGCTACTTCAGGTGGTCTTGTAAATTTATACAATAACCAAAACTTTTGCTTTCACCTTGGTCCAACTCTTAATGAAGCTGAAGACCGATGCATAAATCCTGAAGGTTTTGCTAGTTTCATTGGTCTTCTTGAATCAATTCCTTTACATGATACGGATTCCAGTAATGGGTCTTCGGATTATTCAATGCCTGATTTGAGGTATGTGTTGAAGAAGAGTTTTGGACGTGGATCATTTGGTGAAGTATGGTTGGCTTTTCATTGGAGTTGTAATCAAGATAGTAATGCTACAAAAAGGAGCAGGGATGATACAAATACAAGCAGCAGCTCAACTGCTTCTGATTGTGAAAACGGTCCTTCTAACTACACCCTGTACATTTTGAAACGTATAATGGTGGAGAGGGGGTCAGCTGTTTACTTAAGTGGGCTAAGGGAGAAGTACTTTGGAGAAATTTTTTTAAATGCCTCTACATGCTTTGAAGATACACTATCGGTGGGAAAGTCAAACTGTGTCTTGGAATCATCATCACAGTTTGGTCAAGAGAACTCATTTCCGAACAAATTTCGACTACATAAAACCCCATATGAAGAAGGTTTGAACCATATTGCAAGATATGTGGAATCTTTTGAGTCTCAAGCAAACGAAATTTGGCTTGTATTTAGTTTTGAAGGTGTATCACTGTCAAAACTTCTATATACCGTGGAAGATGCGTATGGTACTGCTGAGCAAGCTAAACATATTCAGATACTACGACCCTCAAAGTGGTGGCATTGGTTGAAAACAACAGAAGAAGGGCAGGCAGAAATGCGCAACCTTATCTGGCAGCTGTTATTAGCTCTCAAGTCCTGTCATGATCGCAACATCACACACAGAGATATTAAACCTGAGAATATGGTGATATGCTTTGAAGATCAGGAAACAGGGAGATGCTTGAAAGAGATTCCCACTAAAGTTAATAATTTTTCCACCAAAATGCGTATTATTGACTTTGGAAGTGGAATTGATGAATACACATTAAATAATTTATATGGTTCTGCTGGGCCTTCGAGAGCTGAACAAACCTATGAGTATACTCCTCCTGAAGCTTTACTAAATGCTACATGGTATCAAGGGCCAACAAGCTCAACTTTGAAATATGACATGTGGAGTGTCGGTGTTGTGATGTTAGAGTTGGTCTTAGGGACACCGGATGTTTTTCAGATAAATGCTTTAACACGGGCTCTATTAGATCAACATCTAGAAGGCTGGAATGAGGGCGTGAAGGAGCTGGCATACAAACTTAGATCATTCATGGAATTGTGCATTTTAATCCCTGGGATCTCCAGGTCCAGCAGTTTCTCAAAAAAGTATCACACAGTGAACCAAGTTGGAGTTTCACCTGCATCTTGGAAATGCTCTGAAGAATTCTTTTCTCGTCAAATTAAGAATAGAGATCCCCTTAAAATAGGTTTTTCAAACATCTTGGCTTTGCGGTTAGTGCGCCGTCTGTTACATTGGGATCCAGAGGATCGGCCAAGTATTGATGAGGCTCTTCAACATCCTTATTTCCAACATCCTCGTAGAGAGTGA 3216 0.4232 MIPKALSQYLSFALGFLLCATIPFVHAESSTCLTVYKNGGAPAVFQSPKCPRWKLSDYDSPPQTTARCQIAMLQGRRNSQEDRALCVLDVRIPFPGENGIKEVAVGIVAVFDGHNGAEASEMASTLLLEYFVLHTYFLLDSAFSVISKTSTETLLHKRDRDHANLLHRWKEIIGSEWHELHFERLQNTFSPNSDVSFHLEILKEALLRAVHDIDAKFSEEASRNNLHSGSTATIVLVADDKILVANIGDSKAILCSENFQSPREAKDLLLKLYRQKEHDGSVSVWDREKYKLASSHGLTHFAVKELTSDHHPDRDDERNRVETAGGQVQNWGGVPRINGQLAITRAIGDVPFKSYGVISAPEVTDWQPLTTNDSYLVVASDGVFEKMSLQEVCDLLWDVHRYSNMRSECTHSSYSLADLIVNNAFKKGSMDNVAAIVIPLDSVKSSANSLRGSYIGKSDAGFPLFGLQETSFKSSSVNGISSDLMHLEHPHLVDTKFKRILVEVKDGDFGCFYLSENLDEPEDSKQIAKKTDWDDYLYELPPPLPNALCHATSGGLVNLYNNQNFCFHLGPTLNEAEDRCINPEGFASFIGLLESIPLHDTDSSNGSSDYSMPDLRYVLKKSFGRGSFGEVWLAFHWSCNQDSNATKRSRDDTNTSSSSTASDCENGPSNYTLYILKRIMVERGSAVYLSGLREKYFGEIFLNASTCFEDTLSVGKSNCVLESSSQFGQENSFPNKFRLHKTPYEEGLNHIARYVESFESQANEIWLVFSFEGVSLSKLLYTVEDAYGTAEQAKHIQILRPSKWWHWLKTTEEGQAEMRNLIWQLLLALKSCHDRNITHRDIKPENMVICFEDQETGRCLKEIPTKVNNFSTKMRIIDFGSGIDEYTLNNLYGSAGPSRAEQTYEYTPPEALLNATWYQGPTSSTLKYDMWSVGVVMLELVLGTPDVFQINALTRALLDQHLEGWNEGVKELAYKLRSFMELCILIPGISRSSSFSKKYHTVNQVGVSPASWKCSEEFFSRQIKNRDPLKIGFSNILALRLVRRLLHWDPEDRPSIDEALQHPYFQHPRRE* 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1796 1071 CDD PP2Cc 74 440 IPR001932 -
Pvu7g1796 1071 ProSiteProfiles PPM-type phosphatase domain profile. 67 440 IPR001932 -
Pvu7g1796 1071 MobiDBLite consensus disorder prediction 643 664 - -
Pvu7g1796 1071 Gene3D - 63 447 IPR036457 -
Pvu7g1796 1071 ProSiteProfiles Protein kinase domain profile. 617 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1796 1071 SMART PP2C_4 59 438 IPR001932 -
Pvu7g1796 1071 SUPERFAMILY Protein kinase-like (PK-like) 616 1067 IPR011009 -
Pvu7g1796 1071 Pfam Protein phosphatase 2C 160 433 IPR001932 -
Pvu7g1796 1071 PANTHER ALPHABET, ISOFORM E-RELATED 21 604 - -
Pvu7g1796 1071 ProSitePatterns Serine/Threonine protein kinases active-site signature. 837 849 IPR008271 GO:0004672|GO:0006468
Pvu7g1796 1071 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 21 604 - -
Pvu7g1796 1071 SUPERFAMILY PP2C-like 66 442 IPR036457 -
Pvu7g1796 1071 SMART serkin_6 617 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1796 1071 Pfam Protein kinase domain 811 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1796 1071 Gene3D Transferase(Phosphotransferase) domain 1 804 1066 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1796 Pvu-Chr7 40897565 40916027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1796 681 1068 PP2C-type Phosphatase Gene Family AT3G63340 64.706 2.74e-172 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Pvu7g1796 Pkinase 1.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1796 - - gmx:100781476 1942.55