Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1791 ATGGAACAGTATGAAATTCTAGAACAGATTGGAAGAGGCTCCTTTGCTTCTGCTCTACTTGTCAGACACAGGCACGAAAACAAGAGGTATGTTCTTAAGAAGATCCGGCTTGCTCGCCAGACGGACAGAATACGCAGATCTGCTCACCAGGAGATGGAGCTTATCTCTAAAGTTCGAAACCCATTTATCGTGGAGTATAAAGATTCCTGGGTAGAAAAGGGTTGTTTTGTATGTATCGTCATTGGCTATTGTGAAGGAGGAGATATGACTGAAGCTATTAAAAAAGCCAATGGCGTACATTTTCCTGAAGAGAGGCTCTGTAAGTGGCTGGTTCAACTGCTGATGGCACTAGATTACTTGCATGCAAATCATATTCTTCATCGTGATGTCAAGTGTTCAAATATATTCTTGACAAAAGATCAAGATATACGTCTAGGTGACTTCGGTCTAGCTAAAATGTTGACATGTGATGATCTTGCATCCTCGGTTGTCGGGACTCCAAGTTATATGTGCCCCGAACTTCTTGCTGATATACCCTATGGCTCTAAATCAGATATCTGGTCTTTGGGATGTTGTGTGTATGAAATGGCTGCTCACAAACCAGCTTTTAAAGCTCTTGATATGCAAGCACTGATTAACAAAATAAACAAGTCATTAGTGGCTCCACTACCAACAGTGTATTCTGGTTCTTTTCGGGGGCTCGTTAAGAGTATGCTGCGGAAGAATCCAGAGCTTCGGCCTAGTGCTGCAGAGTTACTAAATCATCCGCATCTTCAGCCTTACATTCTTAAAATTCACTTGAAATTAAATAACCCTAGAAGAAGTACTTATCCATTCCAATGGTCTGATTCAAACTATGTAAGAAGGACTCAGTTTGTTGAGCCAGATTCTGTTTCTACACTTTCTGGTAGAGGCAAAAGATTGTCATTCAGCAATGACAGGGCATTGAATCCTAGTATATCTGGAACTGAAGTAGGTTCTGTGTGTTCTACTCAAAGAGGTCATGGTTTCTCTTGTTCAAAAGAGAAACACTATGAGCTCTCTGTTGGTTGTGTGCGTGAAGAATGCAATTGTAACAAGTCAAAAGACACAAAGTCCTCAACTGTTGATAGGATGCCAAGATTCAGAACAGCTAAGGAATATGCCACTCCCCGAAGGCAGACAATACCATCAAAGGCATCTCATACAGGTTCCAAGCGTGATTTACTTCCAGCATCTTCTACTCCAGGTGTTAAATTTACACCACCATCTCGCAGAGCTTCTCTTCCACTCCCTACCAAAACCATGTGTATGACCACCCCATATAGAGCTAATGTTGGTCTTCTCCGGGGCATGGACTCTCCTGATGTTTCTGTCAATGCACCGCGAATTGACAAGATTGCCGAATTCCCTCTAGCCTCTTGTCAGGATTCTCTCTTTCCTGTTTGTGGAACTTCATCAAATTCGGCTCAGTGTTCTTCTGGTTCCCCAAAGAGTGCCGAGTGCTTAATCACGAAAGACAAGTGCACAATCCAAGTTGTGGACAAAGTCAGTGTCCCTTCAAGTGTACAATCCCCAAAGGGTGCTGCTCCAGTTTCACATGGCAATGAATGCTCTGAGCATGCTGTTTCAAGTCTCTTCTCTGCCGAGTCTTGCCAACGCAGGTTTGACCCCTCGTCTTACCAGCAACGTGCAGAGGCATTGGAGGGTTTGCTTGAGTTCTCTGCTCGGCTCCTACAGCAACAGAGGTTTGAAGAGCTTGGAGTGTTGTTGAAGCCATTCGGTCCTGAGAAGGTTTCCCCGAGAGAGACAGCTATTTGGTTGGCTAAGAGCTTCAAAGAAACTGTTGCCTAA 1833 0.4381 MEQYEILEQIGRGSFASALLVRHRHENKRYVLKKIRLARQTDRIRRSAHQEMELISKVRNPFIVEYKDSWVEKGCFVCIVIGYCEGGDMTEAIKKANGVHFPEERLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKMLTCDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMAAHKPAFKALDMQALINKINKSLVAPLPTVYSGSFRGLVKSMLRKNPELRPSAAELLNHPHLQPYILKIHLKLNNPRRSTYPFQWSDSNYVRRTQFVEPDSVSTLSGRGKRLSFSNDRALNPSISGTEVGSVCSTQRGHGFSCSKEKHYELSVGCVREECNCNKSKDTKSSTVDRMPRFRTAKEYATPRRQTIPSKASHTGSKRDLLPASSTPGVKFTPPSRRASLPLPTKTMCMTTPYRANVGLLRGMDSPDVSVNAPRIDKIAEFPLASCQDSLFPVCGTSSNSAQCSSGSPKSAECLITKDKCTIQVVDKVSVPSSVQSPKGAAPVSHGNECSEHAVSSLFSAESCQRRFDPSSYQQRAEALEGLLEFSARLLQQQRFEELGVLLKPFGPEKVSPRETAIWLAKSFKETVA* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1791 610 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 599 - -
Pvu7g1791 610 CDD STKc_Nek 3 258 - -
Pvu7g1791 610 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1791 610 Gene3D Transferase(Phosphotransferase) domain 1 84 272 - -
Pvu7g1791 610 SUPERFAMILY Protein kinase-like (PK-like) 1 312 IPR011009 -
Pvu7g1791 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Pvu7g1791 610 MobiDBLite consensus disorder prediction 385 425 - -
Pvu7g1791 610 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1791 610 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1791 610 PANTHER SERINE/THREONINE-KINASE NEK4 1 599 - -
Pvu7g1791 610 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Pvu7g1791 610 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pvu7g1791 610 MobiDBLite consensus disorder prediction 387 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1791 Pvu-Chr7 40860192 40866801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1791 10 289 MAP Kinase Kinase Kinase AT1G53570 29.000 9.57e-36 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Pvu7g1791 Pkinase 1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1791 K08857 - gmx:100810347 1112.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1791 7 40860192 40866801 Pvu7g1791 7 40860192 40866801 ECH
Pvu1g1601 1 41130674 41137899 Pvu7g1791 7 40860192 40866801 PCT