Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1790 ATGGGTAGTGTAGATCATGAGTACCCTCTGGAGATGAATGAAGCTGAGAGTGTGCCACAGCAGAAGCATCATGTAGAAGTTCCAACACCTCAACCATTTTTGAAGTATCTAAAGTTCTCCTTGAAGGAGACTTTCTTCCCAGATGACCCTTTGAGACAGTTCAAAAACAAGCCACCCTCCAAAAAGTTCATGCTTGCTATTCAGTATTTCTTCCCCATCTTCCAATGGGCACCCAAATACACCTTCCACTTCTTCAAAGCTGACCTCATAGCTGGTATCACCATAGCTAGCTTGGCCATTCCTCAAGGCATCAGCTATGCCAAGCTTGCCAACCTCCCTCCAATCCTCGGACTATATTCAAGCTTTATACCACCCTTGATTTATGCCATGATGGGAAGCTCAAGGGATTTGGCGGTGGGGACTGTGGCGGTTGGATCTCTTCTGATGGGTTCTATGTTGAGTGATGAGGTTAATCCCAATGAAGATCCCACACTTTACTTACACCTTGCCTTCACTGCTACATTATTTGCTGGAATTTTTCAGGCTGCTTTGGGTTTCTTTAGGTTGGGGTTGATAGTTGATTTTTTGTCACATGCAACCATAGTAGGGTTCATGGGAGGAGCAGCTACAGTGGTTTGTCTGCAGCAACTAAAATCGATTCTTGGCCTTGTGCATTTCACCCATGGAGCTGATATCATATCAGTGATGCGCTCTGTTTTCACCCAAATTCACCAGTGGAGGTGGGAAAGTTCTGTGTTAGGATTTGTCTTCCTTTTCTTTCTCCTGATCACTAGATACTTCAGCAAAAAACAACCAAGGTTTTTTTGGGTGTCAGCAATGGCGCCATTAACATCGGTTATATTGGGAAGTCTGTTGGTTTATTTCACTCATGCCGAGAAGCATGGAGTTGAAGTGATAGGAGAATTGAAGAAGGGTTTAAATCCACCATCAGTCACAAAGCTGGTATTTGTGTCACCTTATATAACCACAGCTGTCAAAACTGGCATTGTGGTTGGCATCATATCACTAGCAGAAGGAATAGCAGTGGGAAGGAGCTTTGCAATGTATAAAAATTACAATACTGATGGCAACAAAGAGATGATAGCTATTGGGACCATGAACATAATTGGTTCTTTCACCTCTTGCTACATCACAACAGGGCCGTTTTCACGCTCAGCTGTGAACTATAATGCTGGATGCAAGACAGCAGCATCCAACATTATAATGTCAATTGCAGTCATGTTGACATTGCTATTCCTAACACCCTTGTTCCATTACACTCCCCTGGTGGTGCTATCAGCCATTATTGTGTCTGCAATGCTTGGCCTCATAGATTATCAAGCAGCCATCCATCTGTGGAAGATTGACAAATTTGACTTTGTTGTGTGCATGAGTGCATACATTGGCGTGGTCTTTGGCAGTGTTGAAATCGGCTTAGTCATAGCTGTTGCAATATCTGTACTTCGAGTACTTCTATTCATTGCAAGGCCAAGGACATTCGTTTTGGGAAACATTCCAAATTCTGGGATATACAGAAATGTTGAGCAATATCCAAATGCAAAACATGTTCCTGGAATCCTAATCCTAGACATTGATGCACCAATTTACTTTGCCAATGCAAGCTATTTAAGAGAAAGGATCACAAGGTGGATTGATGAAGAGGAAAACAGAATCAAAGCTACTGGAGAGACAAGTTTGCAGTATGTTATAATGAATATGAGTGGTGTTGGAAACATTGATACAAGTGGAATAAGTATGCTTGAAGAGGTCAAGAAGATTACTGAGAGAAGAGAACTTCAACTTGTTTTGGTCAATCCTGGAAGCGAGGTGATGAAGAAACTGAACAAATCGAAGTTCCAAAATCATTTAGGGGAGAGATGGATCTATCTTACTGTTGAAGAGGCCGTTGGAGCATGTAACTTCAATCTCCGTACAAGAACGAATCTGAAGAAAGATGAATCAGAGGGTTGGAACAATGTTTAA 1983 0.4206 MGSVDHEYPLEMNEAESVPQQKHHVEVPTPQPFLKYLKFSLKETFFPDDPLRQFKNKPPSKKFMLAIQYFFPIFQWAPKYTFHFFKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLSDEVNPNEDPTLYLHLAFTATLFAGIFQAALGFFRLGLIVDFLSHATIVGFMGGAATVVCLQQLKSILGLVHFTHGADIISVMRSVFTQIHQWRWESSVLGFVFLFFLLITRYFSKKQPRFFWVSAMAPLTSVILGSLLVYFTHAEKHGVEVIGELKKGLNPPSVTKLVFVSPYITTAVKTGIVVGIISLAEGIAVGRSFAMYKNYNTDGNKEMIAIGTMNIIGSFTSCYITTGPFSRSAVNYNAGCKTAASNIIMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYQAAIHLWKIDKFDFVVCMSAYIGVVFGSVEIGLVIAVAISVLRVLLFIARPRTFVLGNIPNSGIYRNVEQYPNAKHVPGILILDIDAPIYFANASYLRERITRWIDEEENRIKATGETSLQYVIMNMSGVGNIDTSGISMLEEVKKITERRELQLVLVNPGSEVMKKLNKSKFQNHLGERWIYLTVEEAVGACNFNLRTRTNLKKDESEGWNNV* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1790 660 Pfam Sulfate permease family 85 465 IPR011547 GO:0016021
Pvu7g1790 660 Pfam STAS domain 517 635 IPR002645 -
Pvu7g1790 660 TIGRFAM sulP: sulfate permease 72 635 IPR001902 GO:0015301|GO:0016020|GO:0055085
Pvu7g1790 660 ProSitePatterns SLC26A transporters signature. 114 135 IPR018045 GO:0008271|GO:0008272
Pvu7g1790 660 CDD STAS_SulP_like_sulfate_transporter 517 632 - -
Pvu7g1790 660 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 658 - -
Pvu7g1790 660 Gene3D STAS domain 496 642 IPR036513 -
Pvu7g1790 660 PANTHER SULFATE TRANSPORTER 2 658 IPR001902 GO:0015301|GO:0016020|GO:0055085
Pvu7g1790 660 SUPERFAMILY SpoIIaa-like 518 639 IPR036513 -
Pvu7g1790 660 ProSiteProfiles STAS domain profile. 516 639 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1790 Pvu-Chr7 40808690 40816897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1790 20 645 Inorganic Solute Cotransporters AT4G02700 66.826 0.0 876
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1790 K17471 - gmx:100810196 1189.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1790 7 40808690 40816897 Pvu7g1790 7 40808690 40816897 ECH
Pvu1g1600 1 41080510 41087797 Pvu7g1790 7 40808690 40816897 PCT