Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1763 ATGTATTTTGCAGCCCCTCATCTATTAGAAGACTTAACTCAAGAGGACAATCACTACTCTGAAACTGTATCCAACATCCTCCAAAACCAGTCCAGCCGGTGGCCAACCTCGCCGACCTCCGTTGGCTACATCACATATTCCCCGCATTCAGCTTTCGCAAAGTGGAGCAGCCGCGCCAGCCACCTCTTCCAGCCGGCGGTGGACGGCCCCAGCCAGTGGCTCCTCAAGTACATTCTCTTCACGGTCCCCTACCTCCACGCCAAGAACCCCGCCGACACTTCTCCCCAAACCGCCGCAGACCCCAAGCTGCGCGGCAAGGGAACGCCGCAGGACGAGCTGAGCGCCAACCACGTGCTCGCGGAGCGCCGCCGCCGCGAGAAGCTGAACGAGCGGTTCGTAATCCTGCGGTCACTGGTCCCCTTCGTCACGAAAATGGACAAGGCATCCATTCTGGGTGACACCATCGAGTATGTAAAGCAGCTGCGGCGGAAGATCCAGGAGCTGGAGGCGCGAAACCGCCACACTGAGGCCGAACACCGTTCCAAGCTCCCTGAGGTAACGGTTCAAAGGACGAGTAGCAATTCGAGCAAGGAGCAGCAGAGGAGTGGGGTGACAGTGATGGAGAAGAGGAAGGTGAGGATCGTGGAAGGGGTGGCTGCGAAGGCGACGGCGGTGGAGGCTGAGGCGGCAACATCAGTGCAAGTTTCGATCATTGAGAGCGATGCACTGTTGGAGATTGAGTGCCTCCACAGAGAAGGGTTGCTTCTTGACGTGATGCAGATGCTGAGGGAGGTGAGGATAGAGGTTATTGGGGTGCAATCATCACTTAACAATGGGGTGTTCATGGCGGAGTTGAGGGCAAAGGTGAAGGAACATGCGAACGGGAAGAAGGTTAGCATTGTGGAAGTGAAGAAGGCACTCAACCGAATCATTCCCCACGCTGTCCACTGA 951 0.5699 MYFAAPHLLEDLTQEDNHYSETVSNILQNQSSRWPTSPTSVGYITYSPHSAFAKWSSRASHLFQPAVDGPSQWLLKYILFTVPYLHAKNPADTSPQTAADPKLRGKGTPQDELSANHVLAERRRREKLNERFVILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQELEARNRHTEAEHRSKLPEVTVQRTSSNSSKEQQRSGVTVMEKRKVRIVEGVAAKATAVEAEAATSVQVSIIESDALLEIECLHREGLLLDVMQMLREVRIEVIGVQSSLNNGVFMAELRAKVKEHANGKKVSIVEVKKALNRIIPHAVH* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1763 316 MobiDBLite consensus disorder prediction 91 110 - -
Pvu7g1763 316 PANTHER TRANSCRIPTION FACTOR TT8 14 313 - -
Pvu7g1763 316 Coils Coil 151 178 - -
Pvu7g1763 316 MobiDBLite consensus disorder prediction 173 203 - -
Pvu7g1763 316 PANTHER TRANSCRIPTION FACTOR TT8 14 313 - -
Pvu7g1763 316 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 114 182 IPR036638 GO:0046983
Pvu7g1763 316 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 112 161 IPR011598 GO:0046983
Pvu7g1763 316 Gene3D - 112 184 IPR036638 GO:0046983
Pvu7g1763 316 MobiDBLite consensus disorder prediction 186 202 - -
Pvu7g1763 316 SMART finulus 118 167 IPR011598 GO:0046983
Pvu7g1763 316 Pfam Helix-loop-helix DNA-binding domain 115 162 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1763 Pvu-Chr7 40396006 40397270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1763 11 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 40.328 2.85e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pvu7g1763 HLH 4.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1763 - - pvu:PHAVU_007G171400g 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1763 7 40396006 40397270 Pvu7g1763 7 40396006 40397270 ECH
Pvu1g1561 1 40427071 40428154 Pvu7g1763 7 40396006 40397270 PCT