Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1762 ATGGCTGCACCACTAGGCAATAGGCTCCAAAGCATGTTGCAGGCTGCGGTGCAATCTGTTCACTGGACTTATAGCCTCTTCTGGCAACTTTGTCCACAACAAGTGATTCTGGTTTGGGGTGATGGGTACTACAATGGGGCAATCAAGACTAGGAAGACGGTGCAACCAATGGAGGTGAGTGCTGAGGAGGCATCTCTTCAAAGAAGCCAGCAACTTAGAGAACTCTATGAATCATTGTCTGCCGGAGAGACAAATCCACCAACTCGCCGGCCTTGCGCCGCCTTGTCACCAGAGGACCTAACAGAATCCGAATGGTTCTATTTGATGTGTGTCTCATTCTCCTTTCCTCCTGGTGTTGGGTTGCCTGGAAAGGCATATGCTAGGAGGCAGCATGTTTGGCTCACTGGTGCAAACGAGGTGGACAGCAAAACATTTTCACGAGCTATTCTAGCCAAGACAGTGGTGTGCATTCCTTTATTGGACGGAGTGGTTGAGTTCGGTACAACGGATAAGGTTCAAGAAGACCTTAACTTCATTCACCACGTGAAGACATTCTTCACAGACCACCACCACCCTCTGCCGCCCAAGCCCGCCCTGTCCGAGCACTCAACCTCCAACCCCATCTCCTCCTCCGACCACAACCCCGCCGTCATGTACACCGTCGCAGACCCACCCAATCCTACCCAAAACGACGAGATGGACGAAGAGGAGGAGGAAGAGGACGAAGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGCGGAGTCCGCCTCTGAGGAAGAAACCGGAGGCCGAATTCCCGGGCAGGTCACGACGCCGGAGATGGAGGACGTCACGGGGGCGGAGCCGAGCGAGCTGATGCAGCTGGAGATGCCGGAGGATATCCGGGTCGGGTCTCCAAACGACGGATCGAACAACTTGGACTCGGACTTCCATTTGCTGGCGGTGAGTCAAGGAGGGAGCGCGGCGGGGCAAGCTGAGTCGACCCTGAGATGGGGCCCGAGTCAAGAGGCATTACAAGTTCAACTACCAGCTTCAGGTAAACCGGTAGTTATTTAG 1059 0.5477 MAAPLGNRLQSMLQAAVQSVHWTYSLFWQLCPQQVILVWGDGYYNGAIKTRKTVQPMEVSAEEASLQRSQQLRELYESLSAGETNPPTRRPCAALSPEDLTESEWFYLMCVSFSFPPGVGLPGKAYARRQHVWLTGANEVDSKTFSRAILAKTVVCIPLLDGVVEFGTTDKVQEDLNFIHHVKTFFTDHHHPLPPKPALSEHSTSNPISSSDHNPAVMYTVADPPNPTQNDEMDEEEEEEDEEEEEEEEEEEEAESASEEETGGRIPGQVTTPEMEDVTGAEPSELMQLEMPEDIRVGSPNDGSNNLDSDFHLLAVSQGGSAAGQAESTLRWGPSQEALQVQLPASGKPVVI* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1762 352 MobiDBLite consensus disorder prediction 229 258 - -
Pvu7g1762 352 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 186 IPR025610 -
Pvu7g1762 352 PANTHER TRANSCRIPTION FACTOR TT8 8 322 - -
Pvu7g1762 352 Coils Coil 226 262 - -
Pvu7g1762 352 MobiDBLite consensus disorder prediction 199 216 - -
Pvu7g1762 352 MobiDBLite consensus disorder prediction 193 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1762 Pvu-Chr7 40383553 40387926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1762 9 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 73.632 1.07e-103 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1762 - - pvu:PHAVU_007G171300g 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1560 1 40413941 40420139 Pvu7g1762 7 40383553 40387926 PCT
Pvu1g1979 1 45696849 45698654 Pvu7g1762 7 40383553 40387926 PCT