Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1751 ATGGAAGAGCAAAGTAATGAAGAGAGCCCTGTGCAACTAACATCCTGTGACACTGGGGGAACAACCAATGATGTCTCTCATTCAGCTGAGGATCATCTCATTCCCAACCCAAAATTTTTCATTGCAGCATCATCTGGAAGAAATGAGAGCCACTGGACTTGCTTTCCAAAACCATCTCATAACTATGTTGAGTATCTTTCAGAATCCTCAACTTATCTGCCAAACACTTCCACTGATTACATGATGGGAGGTAGTTATCTACCGGTTGGCAACATCAATGATGGCGACGTGGTTAATGGACCAGACAGAAATTTCTTTTACAATGATCCAGGAAAAGTCTGTGCCTTTAAGCCTATTGGTTCTTCAAGTAATGACCTTGACATTAAGAAGCAGGTGGGGTTTTGGAGAGCTGATGAAGGAGAGGAAGTGATTAAAGTCGAAACTGAAAGTAGTCAAAATTTTCTTTATGCTGAGAGTCATGCTTTATGGACAGCAGATTCTCTTGGAGAGAAGCATAATGCTTTGCATGATCCAATGGTAATGGTTGGTGCACCTGCTTTACTTCCCAAATCAGGATGCAGCTCCTCAAAAGAGAAAGCACGTGTCACTGACCGTAAACGCAGGCAACGTATCGCTGATAACCTGAAAGCCTTACACGAATTGCTTCCAAATCCAGCAGAGGGAAGTCAAGCGTACATACTGGACGATATTATTGACTATGTCAAATATTTACAGCTTCAAATAAAGGAACAAAGTGGAAGTAGATTGCAAGAGGAATCAACTGCTATACCACTAGTTTTTCATGAGGGTTACGGTCATTATATTGACCAACAGATGCTGAATGAACCCCTCGAAGAGATAATGGGGAAACTACTTGAAGAACATTCTGCAGCAGCTGGTCAGCTACTGGAGAGTAAGGGTCTTTTCCTGCTGCCTATGGCTTTGGTTGATGATTTGAGTGAGGCTATGCAAATGTTTGGCGAGAGTGCCCTGGTCTGA 999 0.4264 MEEQSNEESPVQLTSCDTGGTTNDVSHSAEDHLIPNPKFFIAASSGRNESHWTCFPKPSHNYVEYLSESSTYLPNTSTDYMMGGSYLPVGNINDGDVVNGPDRNFFYNDPGKVCAFKPIGSSSNDLDIKKQVGFWRADEGEEVIKVETESSQNFLYAESHALWTADSLGEKHNALHDPMVMVGAPALLPKSGCSSSKEKARVTDRKRRQRIADNLKALHELLPNPAEGSQAYILDDIIDYVKYLQLQIKEQSGSRLQEESTAIPLVFHEGYGHYIDQQMLNEPLEEIMGKLLEEHSAAAGQLLESKGLFLLPMALVDDLSEAMQMFGESALV* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1751 332 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 194 255 IPR036638 GO:0046983
Pvu7g1751 332 MobiDBLite consensus disorder prediction 1 30 - -
Pvu7g1751 332 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 195 244 IPR011598 GO:0046983
Pvu7g1751 332 Gene3D - 194 263 IPR036638 GO:0046983
Pvu7g1751 332 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 14 316 - -
Pvu7g1751 332 PANTHER TRANSCRIPTION FACTOR BHLH66-LIKE ISOFORM X1 14 316 - -
Pvu7g1751 332 SMART finulus 201 250 IPR011598 GO:0046983
Pvu7g1751 332 Pfam Helix-loop-helix DNA-binding domain 197 245 IPR011598 GO:0046983
Pvu7g1751 332 CDD bHLH_AtbHLH_like 203 250 IPR045239 -
Pvu7g1751 332 MobiDBLite consensus disorder prediction 7 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1751 Pvu-Chr7 40293287 40295297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1751 202 322 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 39.837 3.85e-20 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pvu7g1751 HLH 5.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1751 - - gmx:100788949 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1751 7 40293287 40295297 Pvu7g1751 7 40293287 40295297 ECH