Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1750 ATGACCATCTCAATGCTCATGTGCAGATTAAGACAACCCATAATAAACATTCCTTGCAGTGGGAAAAGACTGAATGTGAGACAAATTGAGAAAGAGAAAGTAGTGGTGGTAATGGGAGCCACAGGGGCAGGGAAGTCAAGGCTGTCGATTGACCTAGCCAAATGTTTTCCATCAGAAATCATAAACTCCGACAAAATTCAAGTCTACCAAGGTCTCGACATAGTCACAAACAAAATCCCAAAGGAGGACCAACGTGGGGTGCACCACCACTTACTAGGAACAATAAACCCCGACACAGACTTCACACCCACTGATTTCATTGACACGTCATCATCGGCCATTGAGACCATCACCAGAGCCCAGAAGCTTCCAATAATCGTTGGCGGCTCCAACTCGTATCTCGAGGCCTTGATCGACGACGACGATTACAACTTCCGGTCACGCTACGATTTTATCTGCCTCTGGGTTGACGTCGCAATGCCCGTGCTTCAGTCCTACGTGGCGGAACGGGTTGACGACATGTTCCGTAACGGAATGGTTGATGAGCTGAGACCCTTTTACAGTCCCAACGGGGATTACTCTAGAGGGATTAGAAGAGCCATTGGGGTTCCTGAATTTGACGAGTACTTTCGGAGGGAGGAGTTTGTTGACGAGGAAACGAAGCAGAGGTTGTTGGAAGATGCGATTAAGGAAATCAAATTGAACACGTGGAAACTTGCGATGAAACAGTTGAGGAAAATTCACAGGCTGAGGAACGTTAAGAGATGGGAGATTCATCGGTTGGACGCCACGCCCGTGTTTCGAAGGCGTGGGGAAGAAGCCAACGAGGCGTGGAAGAAGGTGGTGGCGGAACCTAGTGCTATGGTCGTTGCTCGCTTTCTCTATGACTCCAAAAATAACCACAACGTTGTTTCTGGACTTAGACTGTTGCCACCTTCAGAGAATGTTATGGCTGCGGCAACGTGCTAG 969 0.484 MTISMLMCRLRQPIINIPCSGKRLNVRQIEKEKVVVVMGATGAGKSRLSIDLAKCFPSEIINSDKIQVYQGLDIVTNKIPKEDQRGVHHHLLGTINPDTDFTPTDFIDTSSSAIETITRAQKLPIIVGGSNSYLEALIDDDDYNFRSRYDFICLWVDVAMPVLQSYVAERVDDMFRNGMVDELRPFYSPNGDYSRGIRRAIGVPEFDEYFRREEFVDEETKQRLLEDAIKEIKLNTWKLAMKQLRKIHRLRNVKRWEIHRLDATPVFRRRGEEANEAWKKVVAEPSAMVVARFLYDSKNNHNVVSGLRLLPPSENVMAAATC* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1750 322 Pfam IPP transferase 146 245 - -
Pvu7g1750 322 Pfam IPP transferase 67 140 - -
Pvu7g1750 322 Gene3D - 31 294 IPR027417 -
Pvu7g1750 322 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 26 301 - -
Pvu7g1750 322 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 142 IPR027417 -
Pvu7g1750 322 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 160 258 - -
Pvu7g1750 322 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 26 301 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1750 Pvu-Chr7 40285383 40286351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1750 147 294 C2H2 Transcription Factor Family AT2G27760 31.429 7.63e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1750 K10760 - gmx:100803964 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1750 7 40285383 40286351 Pvu7g1750 7 40285383 40286351 ECH
Pvu1g1551 1 40282825 40283742 Pvu7g1750 7 40285383 40286351 PCT