Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1739 GATGATGGGAGTGATCGTGTGCATGTGGTTGGAGCTCGGGGTGCCACTGGTTTTGCATTACCTGTTGGAAGTGAGGCATTTGAAGAGTCAGGTCGGTCACTTGTACGTGGAACATTGGATTATCTCCAAGGTCTCAAGATGCTCGGAGTCAAGAGAATTGAACGGGTACTTCCTGTTGGAACTTCCTTGACTGTTGTTGGTGAGGCTGCTAAAGATGATGTTGGGACCATTCGAATTCAGCGACCCCACAAAGGACCATTTTATGTCTCTCCCAAAACAATTGATCAACTAATTGCAAATCTAGGGAAATGGGCAAGGTGGTATAAGTATGCCTCTATGGGCTTGACAGTGTTTGGTGCTTATCTGATAGCTAAGCATGCTATTCGGTTCATATTGGAGAGACGGCGCCGCAGCGAACTACAAAGAAGGGTTCTTGCTGCTGCTGCTGCGAAGAAGTCAGGACCAAATAATGATGTTGAAAAGGCCGACAGCTTATCAGATGTTGCTAAAAGGGATCACTTAATGCCGGATTTGTGCGTAATATGCCTTGAACAGGAATATAATGCTGTTTTTGTTCCGTGTGGACATATGTGTTGCTGTACAGCTTGTTCTTCACACTTGACCAATTGTCCTCTTTGCCGGCGGCAGATAGAGAAGGTTGTCAAGACTTTCCGTCATTGA 681 0.4581 DDGSDRVHVVGARGATGFALPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPVGTSLTVVGEAAKDDVGTIRIQRPHKGPFYVSPKTIDQLIANLGKWARWYKYASMGLTVFGAYLIAKHAIRFILERRRRSELQRRVLAAAAAKKSGPNNDVEKADSLSDVAKRDHLMPDLCVICLEQEYNAVFVPCGHMCCCTACSSHLTNCPLCRRQIEKVVKTFRH* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1739 226 Pfam E3 Ubiquitin ligase 2 119 IPR022170 GO:0004842|GO:0006996|GO:0016567
Pvu7g1739 226 Pfam Zinc finger, C3HC4 type (RING finger) 177 220 - -
Pvu7g1739 226 PANTHER - 1 193 IPR044231 GO:0004842|GO:0016567
Pvu7g1739 226 ProSiteProfiles Zinc finger RING-type profile. 179 214 IPR001841 -
Pvu7g1739 226 SUPERFAMILY RING/U-box 178 220 - -
Pvu7g1739 226 CDD RING-HC_LRSAM1 178 217 - -
Pvu7g1739 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 225 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1739 1 151 C3H Transcription Factor Family AT1G63900 75.497 5.44e-77 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1739 K15688 - gmx:100803252 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1739 7 40192155 40194571 Pvu7g1739 7 40192155 40194571 ECH