Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1728 ATGACTCCTGTCAAACCCTTCATCCTCCTCTTCTTCTTCTGCTTCCTTTCTCTCCCATCCTCTTCCTTATCCGCCACGTGTCCCCTCAACTTCACCGTCCTCGGCACCACCAAGCCCTCCTCCTTCGACTCCTCCCGCTGCCAGGTCGTCACCGAGGCCCTCCGCCTCGTCCAGTCCGACTACCTCCGCCGCAGTGGCTTCTTCCTCGCTCCCTCCAACGCCTCCGACTCCTGCTGGGACAGCTTCCAGTCCTATGTTAACCGCTTCGACCCCACCTACGACATTCGCTCCTCCTGCGGCTACCGAACCTCCTGGATCTCCCAAGGCTGCGTCAACGTCACCACCAAACAAGACTTCGAAGCCCTCGTTCCCCAGTCCACGCTTCAGACCGTGGGGAAGAACTGCAACCAATCGCTCGAGAATAACTCCCCCTGCGCCCTCTGCACCTCCTCCCTCTCCGCTATCCCGCACTTGGGACAGTCCGTCGGCAACCTCACCAGCTGCACTGACTACTCTTCTATCTACGCCGCCGCCTTCGCCAACTACCTCGGCCCCTCCGACCCCGGCACCGCCAAGTGCCTGTTCTCCCTCGAATTTCCCTCCTCCCGTTCCTCCGCCGCCAAAAAAAGAAAGCTTCTTTTTGCGCTTGTTTCTGTTGTCTGTGTCTTGGTCTTCTCCTTGCTGGCTCTCTGCTTTTGGGCGTATCGCAAGTTTGATAAGAACGTGGCTCGGGATAGGGATATTCGTATTGCGGAAACCGGTTTGGCTTCTGGGTTGGACTCCATGGACCAGAGCACCACTTTGATCAGGTTCACTTTCGATGATATCAAGAAGGCAACTAAGAATTTCTCCCGGGATAACATAGTTGGAAGAGGGGGTTACGGGAATGTGTACAAAGGGTTGCTTCCTGATGGGAGTGAGGTTGCGTTTAAGAGGTTCAAGAATTGTTCGGCTGCTGGTGATGCCAGCTTTTCTCATGAGGTTGAGGTTATTGCTAGCGTGAGGCATGTTAACCTTGTTGCCCTGAGAGGTTATTGTTCTGTCACTACTCGTTTAGAAGGTTACCAGAGGATTATTGTTTGTGATATGGTGAAAAACGGGAGTCTCCACGACCATTTGTTTGGTTCCAATGGGGTGAAACTGAGTTGGCCAATTCGTCAGCAGATTGCTCTAGGCACCGCTAGAGGGCTGGCTTATTTGCATTACGGGGCTCAGCCTGCAATCATTCATAGGGATATTAAAGCAAGTAATATACTTTTGGATGATAAGTTTGAAGCCAAGGTTGCAGATTTTGGACTGGCGAAGTTTAACCCCGAGGGGATGACGCATATGAGCACTAGGGTGGCTGGAACCATGGGGTATGTTGCTCCGGAATATGCTTTGTATGGACAGTTGACAGAGAGAAGTGATGTGTTCAGTTATGGGGTTGTGCTTCTTGAGCTTTTGAGTGGGAGGAAGGCGCTTCAGATGAACAATGATGGTCAACCTTCTGCTTTGACTGATTGGGCTTGGTCATTAGTCAGAACAGGAAAGGCTTTGGATGTAATTGAAGATGGCATGCCACAACCTGGTTCAACACAAGTTCTTGAGAAGTATGTGTTAATTGCTGTACTTTGCTCTCACCCGCAGTTGTATGCTAGGCCAACAATGGATCAGGTTGTTAAAATGATGGAGTCTGATGAATCAGTGCCCTCAATACCTGAACGACCAATCCCTCTTGTTGCTGGGAGGCTTGATATTGAGAGATCTGTGAGCAGTAGTGGCTCTGGTCAGCTCTCTAGTCCAACGGGTTATCAAGCATATACTATAGAAAGTGATAGCCAGTTCACTAATTCTAGGGAAGAAAGAAGCTCCAGCTCCAGGATTTTGTGTACAGAATGA 1881 0.5082 MTPVKPFILLFFFCFLSLPSSSLSATCPLNFTVLGTTKPSSFDSSRCQVVTEALRLVQSDYLRRSGFFLAPSNASDSCWDSFQSYVNRFDPTYDIRSSCGYRTSWISQGCVNVTTKQDFEALVPQSTLQTVGKNCNQSLENNSPCALCTSSLSAIPHLGQSVGNLTSCTDYSSIYAAAFANYLGPSDPGTAKCLFSLEFPSSRSSAAKKRKLLFALVSVVCVLVFSLLALCFWAYRKFDKNVARDRDIRIAETGLASGLDSMDQSTTLIRFTFDDIKKATKNFSRDNIVGRGGYGNVYKGLLPDGSEVAFKRFKNCSAAGDASFSHEVEVIASVRHVNLVALRGYCSVTTRLEGYQRIIVCDMVKNGSLHDHLFGSNGVKLSWPIRQQIALGTARGLAYLHYGAQPAIIHRDIKASNILLDDKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGRKALQMNNDGQPSALTDWAWSLVRTGKALDVIEDGMPQPGSTQVLEKYVLIAVLCSHPQLYARPTMDQVVKMMESDESVPSIPERPIPLVAGRLDIERSVSSSGSGQLSSPTGYQAYTIESDSQFTNSREERSSSSRILCTE* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1728 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 408 420 IPR008271 GO:0004672|GO:0006468
Pvu7g1728 626 Pfam SPARK 23 161 IPR043891 -
Pvu7g1728 626 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524
Pvu7g1728 626 Pfam Protein kinase domain 284 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1728 626 Gene3D Transferase(Phosphotransferase) domain 1 364 565 - -
Pvu7g1728 626 SUPERFAMILY Protein kinase-like (PK-like) 265 571 IPR011009 -
Pvu7g1728 626 CDD STKc_IRAK 289 558 - -
Pvu7g1728 626 Gene3D Phosphorylase Kinase; domain 1 252 362 - -
Pvu7g1728 626 MobiDBLite consensus disorder prediction 604 626 - -
Pvu7g1728 626 SMART serkin_6 283 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1728 626 ProSiteProfiles Protein kinase domain profile. 283 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1728 626 PANTHER OS01G0253100 PROTEIN 13 612 IPR045271 GO:0004714|GO:0006468
Pvu7g1728 626 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 13 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1728 Pvu-Chr7 40055056 40058050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1728 8 612 Receptor kinase-like Gene Family AT2G48010 63.115 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Pvu7g1728 Pkinase 9.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1728 - - gmx:100794233 1018.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1527 1 40014299 40015980 Pvu7g1728 7 40055056 40058050 PCT