Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1727 ATGAAGGACAAGGTGGATTCCCCAGTTACAGTTCTGGAGGACTATTTCAGGAGCTCAGATTCAGAATCAAGTTCTTCCAAAGAGCCTGCAGTGGATTCTGAGTCTCAAGACCTTTCAAAACCTGCTTCTAGGTGGCACGCATTTGTTCAGTTGTTTAGGAGTGGGTCGAAGAAACAGATGAACACGTTGCACCCTCTCAGTGCCATCAAGCTCTCCAAAAGAATGAGCACTAGCATGAGGGAGACCATTCTCCCAAGTTGTTTCTTGGATGCAAATGCATCCCCTTGCAGGTCACCGTGGAAGATCTTTACTCATCATGAGATTCAGGTTGCAACCAATTCATTTAGCCAAGAAAATATGATTGGGAAAGGTGGCTATGCTGAAGTTTACAAAGGGTGTTTGCCAAATCGTCAGCTAGTGGCAATTAAACGTTTAACAAGGGGAACAGCTGATGAAATCATAGGGGATTTCTTATCAGAACTTGGTGTAATGGCGCACGTAAACCATCCCAATACTGCTAAACTGGTTGGCTATGGAGTGGATGGTGGAATGTATCTAGTTCTTGAGTTGTCTGAAAAAGGGAGCCTAGCTTCAGTTCTTTATGGTTCCAAGGAGAAACTACCATGGTGTACAAGGCACAAAATTGCATTAGGAATAGCTAATGGTATACTATATCTTCATGAGGGTTGTCAAAGAAGAATTATCCACAGGGATATAAAAGCTGCCAATATCTTGCTCACGGAGGACTTTGAGCCTCAGATTTGTGATTTCGGGCTAGCAAAATGGCTGCCAGAAAATTGGACTCACCACACCGTTTCAAAATTTGAAGGAACTTTCGGTTACCTTGCACCTGAATACTTGCTGCATGGCATAGTGGACGAGAAAACGGACATATTTGCCTTTGGTGTGTTGCTATTGGAATTAGTGAGTGGGCGTCGAGCACTAGATTATTCACAGCAAAGCCTTGTGTTGTGGGCGAAGCCGTTGCTGAAAAAAAATGATATTATGGAGCTGATTGATCCTTCACTAGTAGGTAACTTCGACTCGAGGCAAATGAATCTTATGCTCTTAGCTGCTTCTTTGTGCATACAACAGTCCTCTCTTCGTCGTCCCTCTACAAGACAGGTTGTACAGCTTCTGAACGGTAACCTTAGCTGCTTTAAGGGCATGAAGAAAACCCGAATGCCATTCTTCAGAAGAGTCTTCCGAGAAGAACTTCATGATTCCGAATAG 1233 0.4363 MKDKVDSPVTVLEDYFRSSDSESSSSKEPAVDSESQDLSKPASRWHAFVQLFRSGSKKQMNTLHPLSAIKLSKRMSTSMRETILPSCFLDANASPCRSPWKIFTHHEIQVATNSFSQENMIGKGGYAEVYKGCLPNRQLVAIKRLTRGTADEIIGDFLSELGVMAHVNHPNTAKLVGYGVDGGMYLVLELSEKGSLASVLYGSKEKLPWCTRHKIALGIANGILYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDIFAFGVLLLELVSGRRALDYSQQSLVLWAKPLLKKNDIMELIDPSLVGNFDSRQMNLMLLAASLCIQQSSLRRPSTRQVVQLLNGNLSCFKGMKKTRMPFFRRVFREELHDSE* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1727 410 SMART serkin_6 115 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1727 410 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 408 - -
Pvu7g1727 410 ProSitePatterns Protein kinases ATP-binding region signature. 121 143 IPR017441 GO:0005524
Pvu7g1727 410 SUPERFAMILY Protein kinase-like (PK-like) 96 380 IPR011009 -
Pvu7g1727 410 Gene3D Phosphorylase Kinase; domain 1 90 189 - -
Pvu7g1727 410 ProSiteProfiles Protein kinase domain profile. 115 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1727 410 PANTHER OS08G0249100 PROTEIN 1 408 - -
Pvu7g1727 410 Pfam Protein kinase domain 116 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1727 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Pvu7g1727 410 Gene3D Transferase(Phosphotransferase) domain 1 192 394 - -
Pvu7g1727 410 MobiDBLite consensus disorder prediction 14 39 - -
Pvu7g1727 410 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1727 Pvu-Chr7 40033347 40036971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1727 102 376 Trihelix Transcription Factor Family AT1G68690 41.958 1.77e-67 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pvu7g1727 Pkinase 8.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1727 - - gmx:100780587 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1525 1 39982290 39985033 Pvu7g1727 7 40033347 40036971 PCT