Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1697 ATGGGTGACAACATCAACATTGGCAAAGTCTTGGACAGAGAAGGCTTTAAGTACAGCTTCACATCTTCAACTGCAACTGCAAGTGACACCTCTGAACAAGATGGGGTCATTAAGGAGCAGGATCGGTTGCTTCCAATAGCTAATGTGGGGAGAATCATGAAGCAAACTCTTCCTCCCAATGCCAAGATCTCAAAAGAAGCTAGAGAAACCATGCAGGAATGTGTCTCCGAGTTCATTAGCTTTGTCACTGGGGAAGCTTCTGACAAGTGTCACAAGGAGAAGCGCAAAACCGTGAATGGTGACGATATTTGCTGGGCCTTGGCTACCCTAGGGTTTGATGACTACGCTGAGCCTCTTAAAAGGTACTTGCATAAGTATAGGGAGCTGGAGGGTGAGAGAGCAAACCAAAATAAGGGTAACAGTTATGAAAACAACAACATCGCAAACATATATTAA 456 0.4452 MGDNINIGKVLDREGFKYSFTSSTATASDTSEQDGVIKEQDRLLPIANVGRIMKQTLPPNAKISKEARETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYAEPLKRYLHKYRELEGERANQNKGNSYENNNIANIY* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1697 151 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5 21 145 - -
Pvu7g1697 151 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 21 145 IPR027113 GO:0001228|GO:0006355|GO:0016602
Pvu7g1697 151 SUPERFAMILY Histone-fold 40 141 IPR009072 GO:0046982
Pvu7g1697 151 Gene3D Histone, subunit A 30 149 IPR009072 GO:0046982
Pvu7g1697 151 ProSitePatterns NF-YB/HAP3 subunit signature. 74 90 IPR003956 GO:0005634|GO:0006355|GO:0043565
Pvu7g1697 151 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
Pvu7g1697 151 PRINTS CCAAT-binding transcription factor subunit A signature 90 108 - -
Pvu7g1697 151 PRINTS CCAAT-binding transcription factor subunit A signature 109 127 - -
Pvu7g1697 151 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 43 107 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1697 Pvu-Chr7 39495222 39495677 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1697 32 137 CCAAT-HAP3 Transcription Factor Family AT2G47810 80.189 1.01e-62 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pvu7g1697 CBFD_NFYB_HMF 9.7e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1697 K08065 - gmx:100817274 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1697 7 39495222 39495677 Pvu7g1697 7 39495222 39495677 ECH