Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1689 ATGGGGAGGAAGGGAAGTTGGTTTTCTACTGTGAAGAAAGCTCTAAGCCCTGAATCAAAGGAGAGGAACGATCAGAAAACAAATCGATCAAAGAAGAAATGGTTTGGAAAGCAAAAATTGCATTCAGCATCACAATCCGAAACTGATAAAGCACCTCCTCTTCCTCCACCTGAGGTTATTTTACCTCAGGCTGAGATTGAAACCAGTCATGATCGCATCAGAGTTGAAACTGCAGTGGTTGCTGAGGAACCAGTTCCTGCTGTTCAGACAGCACCTGCGGAGGTTCAAGCCACTACAATTGTTCAGTTACACAGTAAACCAACAGAAGAAGTGGCAGCAATAAGGATTCAGAAAGCTTTTCGGGGATACTTGGCAAGAAGGGCATTGCGTGCTTTAAGGGGACTGGTGAGGTTGAGATCCCTGATGGAAGGGCCAGTGGTGAAACGTCAAGCCATTAGTACCCTCCGTTCTATGCAGACTTTTGCACATTTGCAAACTCAGATTCGTTCTAGGAGGCTCAGGATGTTAGAGGAAAATCAAGCTCTACAGAAACAGCTCTTACAGAAACATGCAAAAGAGCTAGAGAGCACCAGGCTTGGGGAGGATTGGGATGACAGCGTACAATCAAAAGAACAGGTTGAAGCCAAGCTACTCGGCAAGTATGAAGCTTCTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCTCATCAGCAAAACTGGAAGAATTCATCAAGATCCATAAACCCTATGTTCATGGATCCAACCAATCCGACCTGGGGTTGGAGTTGGTTGGAACGATGGACGGCAGCCCGGCCCTGGGAGAGCCATAATCTGATGGAGAAAGAGAAGAATGACAATAAATCTATTAGAAGTTCTGGCCGTGGCATTACCAGTGCTGAAATCAGCAAATCATTTGCTAAATTTCAGCTAAATTCTGAGAAACATTCTCCAACAGCCAGCCAAAATCCAGGCTCACCTAACTTTGAGTCACATTCCCAGCAGTCCCATTCAAATCCTCCCAAGTCAGCTTCTCCAGCAGTTGCCAAGAAGCTGAAGAAAGTGAGTCCAAAGGACATGTTGGCTATAGATGATGACACCAAAAGTCTGGTGAGTGTGCAGTCAGAGAGGCCAAGGAGGCACTCCATTGCTGGATCAACAGTGGAAGATAATGAAAGCCTTGCAAGCTCCCCAGCTATTCCAAGTTACATGGTGCCTACTAAATCTGCCAAAGCTAAGTCCAGAATGCAAAGTCCACTAGCTGCAGAAAATGTGACCCCAGATAAAGGGTCCTCTGCTGGGACTGCAAAGAAACGTCTTAGTTTCCCTGCTTCACCTGCTAGACCAAGAAGGCATTCAGGTCCACCAAAGGTAGAAAGCAGCTTCAATGCTGAAATCACTGTGGGAAATGGTGTGGTTGGTTGA 1425 0.4589 MGRKGSWFSTVKKALSPESKERNDQKTNRSKKKWFGKQKLHSASQSETDKAPPLPPPEVILPQAEIETSHDRIRVETAVVAEEPVPAVQTAPAEVQATTIVQLHSKPTEEVAAIRIQKAFRGYLARRALRALRGLVRLRSLMEGPVVKRQAISTLRSMQTFAHLQTQIRSRRLRMLEENQALQKQLLQKHAKELESTRLGEDWDDSVQSKEQVEAKLLGKYEASMRRERAMAYSFSHQQNWKNSSRSINPMFMDPTNPTWGWSWLERWTAARPWESHNLMEKEKNDNKSIRSSGRGITSAEISKSFAKFQLNSEKHSPTASQNPGSPNFESHSQQSHSNPPKSASPAVAKKLKKVSPKDMLAIDDDTKSLVSVQSERPRRHSIAGSTVEDNESLASSPAIPSYMVPTKSAKAKSRMQSPLAAENVTPDKGSSAGTAKKRLSFPASPARPRRHSGPPKVESSFNAEITVGNGVVG* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1689 474 Pfam IQ calmodulin-binding motif 112 130 IPR000048 GO:0005515
Pvu7g1689 474 MobiDBLite consensus disorder prediction 311 343 - -
Pvu7g1689 474 MobiDBLite consensus disorder prediction 352 375 - -
Pvu7g1689 474 PANTHER IQ-DOMAIN 5-RELATED 1 469 - -
Pvu7g1689 474 MobiDBLite consensus disorder prediction 15 31 - -
Pvu7g1689 474 ProSiteProfiles IQ motif profile. 109 137 IPR000048 GO:0005515
Pvu7g1689 474 Gene3D iswi atpase 106 133 - -
Pvu7g1689 474 MobiDBLite consensus disorder prediction 411 431 - -
Pvu7g1689 474 MobiDBLite consensus disorder prediction 1 58 - -
Pvu7g1689 474 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 469 - -
Pvu7g1689 474 MobiDBLite consensus disorder prediction 311 474 - -
Pvu7g1689 474 MobiDBLite consensus disorder prediction 387 403 - -
Pvu7g1689 474 SMART iq_5 108 130 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1689 Pvu-Chr7 39392488 39396171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1689 1 471 IQD Protein Family AT5G03040 50.820 6.87e-144 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1689 - - vun:114191598 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1689 7 39392488 39396171 Pvu7g1689 7 39392488 39396171 ECH
Pvu1g1814 1 43828223 43832622 Pvu7g1689 7 39392488 39396171 PCT