Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1674 ATGAACTCCAACACTTCCATTTCTCAGTCATTGACGGCGGCGGCCAGTGATGCGTCGGGGAAGAAGGTCAGAAAGCCTTACACCATAACCAAGTCAAGGGAGAGTTGGACTGAGGAAGAGCACGACAAATTTCTCGAAGCTCTTCAACTATTTGACAGGGATTGGAAAAAAATTGAAGATTTTGTAGGTTCAAAAACAGTTATTCAGATTCGAAGCCATGCTCAGAAATACTTCTTGAAAGTTCAAAAGAATGGGACTGTGGCACACGTGCCTCCTCCCCGTCCTAAGCGCAAAGCTGCTCATCCTTACCCACAAAAAGCATCAAAAAATGTTTTGGTGCCATTGCCAGCTTCCATTGGTTATGCTTCTTCAACAAATATGCTTGCACACGGGTTTGCCGCATGGGATGAAACCTCCTTGCTGATGAATATAGGAGCTAGTAAATCCTTGACCTGTCAGGATGAACCCAACAATCTTTGTGGAAATGAAGCTGATATTGGATCAAAGGGGACAACACAGATTACCAACAGCACTCTTAGTGGTGTTAGAAATTCTACTAGATCGCTACCGACTTCTGAGATACCAAAGCAAGGGAAACAAGCTCCAGTTCTTCATGGTTTGCCAGATTTTGCTGAAGTTTACAGTTTCATTGGAAGTGTATTTGATCCAGATACAAATGACCATATCCAAAGGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTATTGTTAATGAGAAACCTCACTGTCAACTTGTCTAGCCCTGACTTTGAACCCATCAAGAAGGCATTGTCATCAAATGATGTGAATGGAATGGAAGTAGGAGTTGCTGCAGGAATTGATGTGAAGAAGCACACAAATGATCTATCATGTCAAACTGCTTAA 891 0.4198 MNSNTSISQSLTAAASDASGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTVAHVPPPRPKRKAAHPYPQKASKNVLVPLPASIGYASSTNMLAHGFAAWDETSLLMNIGASKSLTCQDEPNNLCGNEADIGSKGTTQITNSTLSGVRNSTRSLPTSEIPKQGKQAPVLHGLPDFAEVYSFIGSVFDPDTNDHIQRLKEMDPINFETVLLLMRNLTVNLSSPDFEPIKKALSSNDVNGMEVGVAAGIDVKKHTNDLSCQTA* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1674 296 ProSiteProfiles Myb-like domain profile. 28 78 IPR001005 -
Pvu7g1674 296 Pfam Myb-like DNA-binding domain 33 78 IPR001005 -
Pvu7g1674 296 Gene3D - 36 83 - -
Pvu7g1674 296 SMART sant 32 80 IPR001005 -
Pvu7g1674 296 MobiDBLite consensus disorder prediction 171 199 - -
Pvu7g1674 296 MobiDBLite consensus disorder prediction 1 16 - -
Pvu7g1674 296 ProSiteProfiles SANT domain profile. 31 84 IPR017884 -
Pvu7g1674 296 MobiDBLite consensus disorder prediction 171 195 - -
Pvu7g1674 296 CDD SANT 35 78 IPR001005 -
Pvu7g1674 296 MobiDBLite consensus disorder prediction 1 32 - -
Pvu7g1674 296 PANTHER SWI/SNF COMPLEX-RELATED 5 290 - -
Pvu7g1674 296 PANTHER PROTEIN REVEILLE 8 5 290 - -
Pvu7g1674 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 82 IPR017930 -
Pvu7g1674 296 SUPERFAMILY Homeodomain-like 27 83 IPR009057 -
Pvu7g1674 296 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 31 80 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1674 Pvu-Chr7 39221146 39227655 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu7g1674 Myb_DNA-binding 4.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1674 - - gmx:100797466 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1674 7 39221146 39227655 Pvu7g1674 7 39221146 39227655 ECH
Pvu1g1805 1 43704659 43707648 Pvu7g1674 7 39221146 39227655 PCT