Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1671 ATGAGAAGGGTTGTCCAGATGAGTGTCGATGGCGACAGCAAAGAGCTGAAAGAACTGAGTCAGCGCTTACGAGATGCGAAGAAGATTGCTGGTGGGGAACATGAGTTATGCGAGGGTGATGAAGTGAAATGTAATGGAGTAAATGAAGAAGTTAAGGTTGGACAGGGGGGGACTGTGGAGTCCTCCTCTACTCAGCAGCATATTCCACAGCCTCAAGGGGCAATAGTATGTTGGGAGAGATTTTTGCATATTAGATCCCTTAAAGTCTTGCTTGTGGAGAATGATGACTGTACTCGTCATGTTGTCACTGCACTGCTTCGCAACTGTAGTTATGAAGTTATTGATGCAGCAAACGGATTGCAAGCTTGGAAGATATTGGATGATTTAACCAATCATATTGATCTCATTTTAACTGAAGTGGCAATGCCTGGCTTATCAGGCATTGGTCTTCTATACAAGATTATGGGCCACAAAACTCGGAAAAATATTCCAGTAGTTATGATGTCGTCTCTTGATTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCCGTTGACTTTCTAGTTAAACCCATACGGAAGAATGAGCTCAAAAACCTGTGGCAGCACGTTTGGAGAAGATGCCACAGTTCTAGTGGGAGTGGCAGTGAAAGTGGAACGCAAACGCAGAAGTCTGTGAAATCAAAGAGTCTTGGGAAGTCTGATAATTTTGGGAGCAATGATGATGATAATGGAAGTGGAGGCCTGAACAATGGGGATGGAAGTGACAATGGTAGTGGCACTCAGAGCTCATGGACCAAACGTGCTGTAGAAGTTGATAGTCCTAAACCTGTCTCTCAGTGGGATCAAATAGCTGAGTGCCCCGACAGTACCTGTGCTCAAGTTGTTCACTCCAATGCTGAAATCAATGGGAACCGGGTGGTTCTCCTAGGTGCAAAGGAGTCTCCAGAACAGAAGGAACAACCTGGTTCTAAACATAGCAATGTACCTGATGCCGGCCCCTCTAAACCACTGGACCTTAATTGTGAAAATCAATCTACCAAGCTAAGGTGCAAAGGCTTATCGTTGTCTGATGCCATTACTAGCACTTCTGATTCTCAGATGCATAGTGGAGAATTTGAAGCCTTAAATAAAAGGCCGAAGTCCTCAGATATTGAAAATAAAGGTAATAATAATGATGAAGAATTGCCATCACTAGGCCACCTTTGTTTAAAGAGGCTTAGAGGAGTTAAAGATGCCGGTGTTACAATTCAGGATGACAGGAGTGTCTTAAGACGTTCTGATCAGTCTGCTTTCTCAAGGTACAATGCAGCCTCTAACACTAAGATATCTCCCACTGGATGTGTTGGAAGCAATTCTCCCTATAATAATAGCTTAGAAGTTACAAAGAAAGATTCATCTCGTGATATTCAATCTCATTCTAGCGGCAATCCTCCTAACCAAAATTCGAATGGTGCTAGCAATAACATTGATATGGGTTCCACTACTAATAATGCTTATGCTAAATCTGCAGTTATAAGTGAGTCAGCAGTGGCTTCAACCAAATGTTTGTACCAAACATCCACTTTCCAGCCTATAAAAAACAACCTTGTCTGTAACTCTCAACAAGTTATCTTACATAACCCTGAAGATAAAGCAGCAACAAGGCTGGCACTACCTAAAGTAGACAGACATCAAGATTCTGCAGCTCCGGACTTCCATCTCCATCATGAAAACCATAACTGTACTGCTGACATGCACCAGCTGCCACCTGATCATGATGCTGAATCTGCAAAGAAAACGGCTATTGCTGCTACTCCACATTGTGTGTCATCAAGTGTGGTTGAAGTGCTAGTTGAAGGTAATGTTGGAAACCTCAGTATCAATAGAAGTGTTTCAGGAAGCAATAATGGAAGCAATGGACAAAATGGGAGCAGCACAGCAGTTAATGCTGGAGGAACAAACATGGAAAGTAACAATGGACTTCCTGGGAATAGTGGCAGTGGCGATGCTAGTGGAAGTGGAAGTGCCAACAAAGTAGATCAGAACAAGACTTCTCAAAGGGAAGCAGCCTTAACTAAATTTCGCCAAAAGAGAAAAGAAAGAAACGAGCGGTGCTTTCATGAAAAGGTTCGATATCAGAGCAGAAAGAAATTAGCCGAACAACGACCTCGATTTCGTGGACAGTTTGCTAGACAGTCGTCTAACGAAAAGACAAGTGAGGCAACGACAGAGAGGTGA 2223 0.4296 MRRVVQMSVDGDSKELKELSQRLRDAKKIAGGEHELCEGDEVKCNGVNEEVKVGQGGTVESSSTQQHIPQPQGAIVCWERFLHIRSLKVLLVENDDCTRHVVTALLRNCSYEVIDAANGLQAWKILDDLTNHIDLILTEVAMPGLSGIGLLYKIMGHKTRKNIPVVMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSLGKSDNFGSNDDDNGSGGLNNGDGSDNGSGTQSSWTKRAVEVDSPKPVSQWDQIAECPDSTCAQVVHSNAEINGNRVVLLGAKESPEQKEQPGSKHSNVPDAGPSKPLDLNCENQSTKLRCKGLSLSDAITSTSDSQMHSGEFEALNKRPKSSDIENKGNNNDEELPSLGHLCLKRLRGVKDAGVTIQDDRSVLRRSDQSAFSRYNAASNTKISPTGCVGSNSPYNNSLEVTKKDSSRDIQSHSSGNPPNQNSNGASNNIDMGSTTNNAYAKSAVISESAVASTKCLYQTSTFQPIKNNLVCNSQQVILHNPEDKAATRLALPKVDRHQDSAAPDFHLHHENHNCTADMHQLPPDHDAESAKKTAIAATPHCVSSSVVEVLVEGNVGNLSINRSVSGSNNGSNGQNGSSTAVNAGGTNMESNNGLPGNSGSGDASGSGSANKVDQNKTSQREAALTKFRQKRKERNERCFHEKVRYQSRKKLAEQRPRFRGQFARQSSNEKTSEATTER* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1671 740 Coils Coil 9 29 - -
Pvu7g1671 740 MobiDBLite consensus disorder prediction 211 270 - -
Pvu7g1671 740 Gene3D - 86 235 - -
Pvu7g1671 740 PANTHER TWO-COMPONENT RESPONSE REGULATOR 337 716 IPR045279 GO:0009736
Pvu7g1671 740 PANTHER TWO-COMPONENT RESPONSE REGULATOR 29 318 IPR045279 GO:0009736
Pvu7g1671 740 SUPERFAMILY CheY-like 85 211 IPR011006 -
Pvu7g1671 740 MobiDBLite consensus disorder prediction 316 343 - -
Pvu7g1671 740 MobiDBLite consensus disorder prediction 444 462 - -
Pvu7g1671 740 MobiDBLite consensus disorder prediction 472 495 - -
Pvu7g1671 740 CDD psREC_PRR 89 192 - -
Pvu7g1671 740 MobiDBLite consensus disorder prediction 211 281 - -
Pvu7g1671 740 MobiDBLite consensus disorder prediction 373 392 - -
Pvu7g1671 740 SMART REC_2 87 202 IPR001789 GO:0000160
Pvu7g1671 740 Pfam Response regulator receiver domain 89 200 IPR001789 GO:0000160
Pvu7g1671 740 MobiDBLite consensus disorder prediction 709 740 - -
Pvu7g1671 740 MobiDBLite consensus disorder prediction 627 683 - -
Pvu7g1671 740 ProSiteProfiles Response regulatory domain profile. 88 206 IPR001789 GO:0000160
Pvu7g1671 740 MobiDBLite consensus disorder prediction 363 398 - -
Pvu7g1671 740 ProSiteProfiles CCT domain profile. 685 727 IPR010402 GO:0005515
Pvu7g1671 740 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 29 318 - -
Pvu7g1671 740 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 337 716 - -
Pvu7g1671 740 MobiDBLite consensus disorder prediction 444 495 - -
Pvu7g1671 740 Pfam CCT motif 682 727 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1671 Pvu-Chr7 39092545 39108437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1671 163 729 Response Regulator Gene Family AT5G02810 45.586 1.03e-99 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pvu7g1671 Response_reg 1.2e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1671 K12129 - gmx:100796933 1152.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1671 7 39092545 39108437 Pvu7g1671 7 39092545 39108437 ECH