Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1669 ATGGGTTGGATTCCCTGTTCCGGAAATTCAAACACTAAGAAGAAGCTAAAGAAGAAGTTGGAGAAGATGGAAGTGCAGAGCAGTCTTGTTGATCCGATCAAAGCCACCCCAGGGAAATTGAAGAGGAATTCATCCATGAATTCCAAAGATTCCTCTAGAAATGGAAACCCTGATCACATTGCTGCACAGACATTCTCATTCCGTGAGTTGGCAACTGCTACTAGAAACTTCAGAGCTGAATGTCTTTTAGGCGAGGGAGGCTTTGGAAGAGTCTACAAGGGGCGTTTGGAAAGTATTAATCAAATTGTTGCAATTAAACAACTTGACCGAAATGGACTACAAGGGAATAGAGAGTTCCTTGTTGAAGTTTTGATGTTAAGTCTTCTTCACCACCCTAACCTTGTCAACCTGATTGGTTATTGTGCTGATGGGGATCAAAGGCTTCTAGTTTATGAATTTATGTCATTAGGATCATTGGAAGACCACTTACATGATATTTCTCCTGGGAAGAAACAACTTGATTGGAACATACGGATGAAAATAGCTGCTGGAGCTGCAAGGGGATTGGAATATTTACACGACAAAGCTAATCCTCCTGTCATATACCGAGATTTAAAATGCTCCAATATTTTGCTTGGTGAAGGATATCATCCTAAGTTATCTGATTTTGGTCTGGCTAAACTTGGTCCCGTGGGGGAAAACACCCATGTATCTACAAGGGTTATGGGAACCTATGGATATTGTGCTCCAGAGTATGCAATGACAGGTCAACTGACTCTGAAATCAGATGTTTATAGCTTTGGTGTTGTTCTTCTGGAAATAATTACTGGAAGGAAAGCAATTGACAATTCAAGATCTGCAGGAGAGCAGAATCTTGTTGCTTGGGCCAGACCCTTGTTCAAAGATCGAAGAAAATTCTCACAAATGGCTGATCCAATGCTCCAAGGTCAATATCCTTCAAGAGGGCTATACCAGGCTCTTGCTGTTGCAGCTATGTGTGTTCAGGAGCAGGCCAATATGCGTCCAGTTATAGCTGATGTTGTCACTGCTTTGAGTTACCTTGCGTCACAAAAATATGATCCCAGTACACAGACTGTACAAAGCTCTCGCCATGCTCCTGGTACTCCTCCTAGAACCAAGAGGGGATAG 1149 0.4238 MGWIPCSGNSNTKKKLKKKLEKMEVQSSLVDPIKATPGKLKRNSSMNSKDSSRNGNPDHIAAQTFSFRELATATRNFRAECLLGEGGFGRVYKGRLESINQIVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSLGSLEDHLHDISPGKKQLDWNIRMKIAAGAARGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSRSAGEQNLVAWARPLFKDRRKFSQMADPMLQGQYPSRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQKYDPSTQTVQSSRHAPGTPPRTKRG* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1669 382 SUPERFAMILY Protein kinase-like (PK-like) 57 351 IPR011009 -
Pvu7g1669 382 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1669 382 MobiDBLite consensus disorder prediction 40 58 - -
Pvu7g1669 382 Pfam Protein tyrosine and serine/threonine kinase 81 349 IPR001245 GO:0004672|GO:0006468
Pvu7g1669 382 Gene3D Transferase(Phosphotransferase) domain 1 154 372 - -
Pvu7g1669 382 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1669 382 MobiDBLite consensus disorder prediction 362 382 - -
Pvu7g1669 382 MobiDBLite consensus disorder prediction 34 58 - -
Pvu7g1669 382 CDD STKc_IRAK 83 351 - -
Pvu7g1669 382 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED 1 381 - -
Pvu7g1669 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Pvu7g1669 382 PANTHER OS07G0668900 PROTEIN 1 381 - -
Pvu7g1669 382 Gene3D Phosphorylase Kinase; domain 1 61 153 - -
Pvu7g1669 382 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1669 Pvu-Chr7 39070612 39074262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1669 37 356 Glycoside Hydrolase AT3G07070 68.750 6.87e-166 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pvu7g1669 PK_Tyr_Ser-Thr 5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1669 - - gmx:100499648 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1799 1 43664366 43667791 Pvu7g1669 7 39070612 39074262 PCT