Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1662 ATGATGGTTAGATCTTGTTGGAAACCAATTGCTGATGGTGATGAAGGAGATGGGAGTGGGAGAGTTGATGGACTTCTATGGTACAAGGATTTGGGGAACCATCTTTATGGGGAATTCTCAATGGCTGTAGTTCAGGCCAATAGTTCATTAGAGGATCGAAGTGAACTTGAATCTGGGCCTTTGACTTCCAACCCCTTGGGTCCTCAAGGGACCTTTATTGGTGTCTATGATGGCCACGGTGGAAGCGAGGCCTCACAGTTTGTCAGTGACAATCTCTTCTGCAATATCAAAAGGCTTGCAGCTGAACATCAAGGTATCTCAGAACATGTTGTCAAAAGGGCATATTCAGCAACAGAGGAGAGTTTTCTGTCTCTTGTGAAGAAACAGTGGCTGAGTAAGCCTCAGATTGCGTCTGCGGGCACTTGTTGCTTGGTGGGGGTAATTTGCAATGGAATGATATATATTGCAAATTCTGGAGACTCCCGGGTGGTGTTAGGAAGAGTAGAGAGAGCAACAAGGGAAACAGAAGCTATACAACTATCTACAGAACACAATGTTAACCAAGAAACAGTGAGAGATGAACTTCGCTCAAAGCACCCTTTTGATTCACAAATCGTGGTATTGAGACAAAACGTTTGGCGTGTGAAAGGGCTCATACAGGTTTCACGATCCATTGGGGACGCATATCTGAAGAAAGCAGAATTCAACAGGGATCCTCTACCAGCAAAGTATAGGCTAGCAGAAACATTCTTCAGGCCAATTCTTAGTTGTGAGCCATCAACATCATCCCACACACTCCATCCTGATGATCAATTTCTCATATTTGCTTCTGATGGTTTATGGGAGCATCTTACCAACCAAGAGGCTGTTAACATAGTCAACAGCAACCCACCAAACGGAGTTGCCAGAAGACTTGTGAAAGCTGCACTTAGAGAAGCTGCTAAGAAGTGTGAAATGAGACTTTCTGACCTCCAAAAGATTGAGCAAGGGATGAGGAGGCACATCCATGATGACATAACAGTGATTGTGGTGTTTCTTAATTCCAGAAGTGAGAATACCTCTCTCTGTGGTTCTCCTCTTTCAATCAAGGGAGGTGGGTCTGCCAATTCCTAG 1113 0.4447 MMVRSCWKPIADGDEGDGSGRVDGLLWYKDLGNHLYGEFSMAVVQANSSLEDRSELESGPLTSNPLGPQGTFIGVYDGHGGSEASQFVSDNLFCNIKRLAAEHQGISEHVVKRAYSATEESFLSLVKKQWLSKPQIASAGTCCLVGVICNGMIYIANSGDSRVVLGRVERATRETEAIQLSTEHNVNQETVRDELRSKHPFDSQIVVLRQNVWRVKGLIQVSRSIGDAYLKKAEFNRDPLPAKYRLAETFFRPILSCEPSTSSHTLHPDDQFLIFASDGLWEHLTNQEAVNIVNSNPPNGVARRLVKAALREAAKKCEMRLSDLQKIEQGMRRHIHDDITVIVVFLNSRSENTSLCGSPLSIKGGGSANS* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1662 370 SMART PP2C_4 32 344 IPR001932 -
Pvu7g1662 370 CDD PP2Cc 36 346 IPR001932 -
Pvu7g1662 370 PANTHER ALPHABET, ISOFORM E-RELATED 3 368 - -
Pvu7g1662 370 Pfam Protein phosphatase 2C 60 315 IPR001932 -
Pvu7g1662 370 Coils Coil 307 327 - -
Pvu7g1662 370 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Pvu7g1662 370 SUPERFAMILY PP2C-like 48 348 IPR036457 -
Pvu7g1662 370 ProSiteProfiles PPM-type phosphatase domain profile. 35 346 IPR001932 -
Pvu7g1662 370 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 368 - -
Pvu7g1662 370 Gene3D - 29 354 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1662 Pvu-Chr7 38998164 39000962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1662 2 366 PP2C-type Phosphatase Gene Family AT3G12620 64.499 5.63e-179 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1662 K01102 - gmx:100819870 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1662 7 38998164 39000962 Pvu7g1662 7 38998164 39000962 ECH
Pvu1g1794 1 43640821 43643456 Pvu7g1662 7 38998164 39000962 PCT