Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1653 ATGGTACAAACAAAGGCACTGAGAGTTGCAGAGAAAGGGAGAAAATTGATTCCAATGTCAGGAAGTCCTTCATCATTGGTCGTGTCTACTTCTCTAACAAAGTATGATGTGTTTCTCAGCTTCAGAGGGAAAGACACACGTGACAACTTCATTAGCCACCTTTATGCAGCACTGCAAAGGAAGAACATAGAAGCATATATTGATTACAGACTACGCCGGGGCGAAGAAATTTCACCTGCACTGCTCTCTGCAATAGAAGAATCAAAGATTTATGTCGTCGTTTTCTCAAAAAACTATGCATCTTCCACATGGTGTTTGAATGAACTCACTAAGATACTTGAATGCAAGAAGAGATATGCAAGGGATGTGATACCTATTTTCTACAAGGTGGATCCATCAACTATTAGGAAGCAGGAAGAAAGATACAAAGAAGCATTCGATGACCATGAGCAGCACTTTAAGCACGACATGGACAAAGTGCAAGGATGGAAGGATGCTCTCACCGAAGCTGCTGGACTTTCAGGCTGTGATTCAAAAGTCACCAGGACAGAACACATACTTGTTGAAAAAATTGTGGAAGATATTTTGAGAAAATTGAATCTTTATTCCACCAGTTATGATCAAGGAATCATCGGCATTGAAAAACATATTGAAGGAATTCAGTCCTTGTTGCATCCTGAGTCACCGGATGTTCGGATCATAGGAATTTGGGGCATGGGAGGAATAGGAAAAAGTACAATTTGTGATCAAATATATCACAAATTGGCATTGCAGTTTGATTCCAGCAGCCTTGTTTTAGACGTTCAAGAAAAAATACAAAGAGATGGAGTAGACCGTATCAAAACAAAATATGAGTCTGAGCTTCTAAAGGAAGAGAAATCCCCTTATCTATCATATTACAATGAAAGGCTCAAACGGAAAAAGGTTCTCCTCATTCTTGATGACGTTACCGATTCAGCTCAACTTCAAAAATTAATAGGAGGGAGTGATAGCTTTGGGCAGGGCAGTAGAATCATTATGACCAGTAGAGACAGACAAGTGCTTAAGAATGCTGGAGCTGATGATATCTACGAAGTTAAGGAGTTGAATTTTTATGATTCTATGAGACTTTTTAGTTTACATGCTTTTAAACAAAAATCTTCAGAAGAAATTGCTTACAGGGAACTGTCAGAAAAGGTGTTGAGATATGCAAAAGGGATTCCGTTAGCTCTCCAGATTTTGGGCTCATTGCTTTATGGCAGAACAAGAGAAGCATGGGAGAGTCAGTTGCAAAAGTTGAAAAAGGGCCAACATCTTGGTATTTTCAATGTATTAAAATTAAGTTATGATGGGCTCGAGGAGGAGGAGAAGAATATATTTCTTGACATAGCTTGCTTTTATAGAGGACGCGTGGAGATTGTGGTAGCAGAAACACTTGGTGACTGTGGTTTCTCTTCTAAGATTGGAATGGATATTCTCAAAGATAGGGGCCTAATATCTGTCTTTAATGATAGAATTGTGATGCACGATCTAATACAAGAAATGGGTCAAGAAATTGTTCGTAAAGAGTGTCCTGAGCATCCTGGAAAACGCAGCCGATTGTTGAATGCTGAGGAAATTTGTGAGGTTTTAAGAAAGAACAAGGGGTCAGATGCAATACAGTGTATATTACTAAAAATGAACAAAGTAAAAGAAGCTGTAGTACATGCACAAAGTTTCGAAAAGATGGACAATCTTAGGATGCTCTACACTGATTACGATCCAAATGTGTCTCTTGAATCATCTCTTGTAAGTCTGCCAGACACTCTAAAGATTCTTTATTGGAAAGATTTCCCTCAAAGATCTTGGCCTCCAAACTTTTGCCCACAAAATCTAGTGACCCTCGAAATGCCAAGCTGCCATCTTGAACAACTCTGGGAAGGAGATCAGAATTTACCAAAGTTGAAAAGGCTGGACCTGAGTGGTTCTCTGAAACTTACTAGAATACCAGACCTTTCTCTGTCACCAAATATTGAAGAAATAATTCTGACTTATTGTGAAAAGTTGATTCAAGTTCAGTCTTCCATATTCCTGAGCAAGCTCAGTTATTTATGTTTAGATTATTGTTATGATCTGAATAGTGTAAATATTCCCAGCAGCATTTTATCCACATCACCAGGATGGATTACTCTTTCCCGTTGTGGGAAGCTTAATATGTTTTCAACCAGTGAAGCCAGATTCCCTCATGTCATACTGGAGCGTCAACGTCATACTTTCTCAAGATTCCCTCGTAAGGAACCGGATATGATGAAAGAGATAAATTTCTCAGGACGGCGTGGTAAACGTCGACACCATGGTCCTTTTTTCCCAACTTGCAGTGAAATTTTCTCAATTACTTTTGACAGATATAATGAAGAAGAAGTGGCTAATAATACTATATGCTTAGAAGTGTTGACAGAAATCCAGGAAGACGACACAGCCATACAGGCACTGCCTTCATCCTTGTGCCGTTTGGAAGGGCTTGAAGAACTGAGTTTGCGCAGTTGCTTGAATCTTGAGATTATTCCATCTTCCATTGGAAGCCTCACCAGACTATGCAAGTTACACCTTACCCACTGTAGTTCACTTCAAACTTTTCCAAGCACCATTTTCAATTTGAAGTTGAGGAAGCTTGATTTGGGTGGTTGCTCAAGGCTCAGGACCTTCCCAGATATCACGGAGCCGGCTCATACTTTTGCTCACATTAACTTAACATCTACGGCTGTTAAAGAACTGCCTTCCTCATTTGGCAATTTCGTTAATCTTCGATCCCTGGAGCTCCACAAATGCACTCATCTCGAGTCACTTCCAAACTCCATTGTTAATCTGAAGCTTCTCTCTAAACTTGATTGTTCGGGATGCCCCAAATTAACAGAAATCCCAAGACACATTGGTCGTTTGACGTCACTAATGGAACTGTCACTGCGTGATAGCGGAATCCTGAACCTTCCTGAGAGCATTGCTCATCTTTCAAGCTTGAAATCGCTTGATTTAAGCGACTGCAGAAAGCTTGAATCCATCCCACAGATTCCACCATTTCTAAAACAACTCGTGGTATTGGATTGCCCATCCATTAGAAGAGTGATGTCAAATTCTCTTGTTCGGAACCTCTCAAATTCCAAAGAGGGTGTATTCAAATTTCATTTCATCAATTCTCTACGACTGGATTCAGGTGCTCGAGCTAACATTGAGGAGGATGCAAGGCTTAGGATGGCCGATGATACATATAGATCTGTGTTCTTCTGTTTTCCAGGGAGTGCAGTTCCTCGTTGGTTCCATTTTCGTGGGAAGGGACATTCAGTGACTATAAATGAAGATTTAAGTTTTTGCACCGATGATAGGCTCACTGGTTTCTCTTTGTGCGTGGTTTTTGGAGTGTTAGATACGAATGATATTAAAGGTAGATATAGTTCTTTTCGTTACAGCCTAAAATTTGAATCTGATGATGATGGCACACAGATCATTCCAAATAATGATGTGTTAAACAGCTATTTCAAATGGGATGATGAAGACAGAGGTGTTGATCAAGATCACACATTCGTGTGGAAATTTAACTTGGAGTCCCTAAGGGCGAGCGGCATGAGCCTTAGGCTCTGTGATGCTCGCAGCTTCACTTTTGAGATCACTCCGTATGATTATAGCTTTGGGTGGCCAGATTACGAATCAGTGGTGAGAGAGTTGAAATCAGCTATCACAATAAAAGAATGCGGCATATGCCCTCTTTATACCAAAAAGAAAGATGATAAATATGGTGGTGTTGTTGAACATGAAGAATCAAGTGGAAGCAATGTTGCACGGTTTTCAAAAGAAACAAGGGAAGATAGGAAGAGGAAGGCCGAAAGCTAA 3843 0.4012 MVQTKALRVAEKGRKLIPMSGSPSSLVVSTSLTKYDVFLSFRGKDTRDNFISHLYAALQRKNIEAYIDYRLRRGEEISPALLSAIEESKIYVVVFSKNYASSTWCLNELTKILECKKRYARDVIPIFYKVDPSTIRKQEERYKEAFDDHEQHFKHDMDKVQGWKDALTEAAGLSGCDSKVTRTEHILVEKIVEDILRKLNLYSTSYDQGIIGIEKHIEGIQSLLHPESPDVRIIGIWGMGGIGKSTICDQIYHKLALQFDSSSLVLDVQEKIQRDGVDRIKTKYESELLKEEKSPYLSYYNERLKRKKVLLILDDVTDSAQLQKLIGGSDSFGQGSRIIMTSRDRQVLKNAGADDIYEVKELNFYDSMRLFSLHAFKQKSSEEIAYRELSEKVLRYAKGIPLALQILGSLLYGRTREAWESQLQKLKKGQHLGIFNVLKLSYDGLEEEEKNIFLDIACFYRGRVEIVVAETLGDCGFSSKIGMDILKDRGLISVFNDRIVMHDLIQEMGQEIVRKECPEHPGKRSRLLNAEEICEVLRKNKGSDAIQCILLKMNKVKEAVVHAQSFEKMDNLRMLYTDYDPNVSLESSLVSLPDTLKILYWKDFPQRSWPPNFCPQNLVTLEMPSCHLEQLWEGDQNLPKLKRLDLSGSLKLTRIPDLSLSPNIEEIILTYCEKLIQVQSSIFLSKLSYLCLDYCYDLNSVNIPSSILSTSPGWITLSRCGKLNMFSTSEARFPHVILERQRHTFSRFPRKEPDMMKEINFSGRRGKRRHHGPFFPTCSEIFSITFDRYNEEEVANNTICLEVLTEIQEDDTAIQALPSSLCRLEGLEELSLRSCLNLEIIPSSIGSLTRLCKLHLTHCSSLQTFPSTIFNLKLRKLDLGGCSRLRTFPDITEPAHTFAHINLTSTAVKELPSSFGNFVNLRSLELHKCTHLESLPNSIVNLKLLSKLDCSGCPKLTEIPRHIGRLTSLMELSLRDSGILNLPESIAHLSSLKSLDLSDCRKLESIPQIPPFLKQLVVLDCPSIRRVMSNSLVRNLSNSKEGVFKFHFINSLRLDSGARANIEEDARLRMADDTYRSVFFCFPGSAVPRWFHFRGKGHSVTINEDLSFCTDDRLTGFSLCVVFGVLDTNDIKGRYSSFRYSLKFESDDDGTQIIPNNDVLNSYFKWDDEDRGVDQDHTFVWKFNLESLRASGMSLRLCDARSFTFEITPYDYSFGWPDYESVVRELKSAITIKECGICPLYTKKKDDKYGGVVEHEESSGSNVARFSKETREDRKRKAES* 1281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1653 1280 SUPERFAMILY "Winged helix" DNA-binding domain 434 537 IPR036390 -
Pvu7g1653 1280 Gene3D - 362 446 IPR042197 -
Pvu7g1653 1280 SUPERFAMILY L domain-like 585 1008 - -
Pvu7g1653 1280 SUPERFAMILY Toll/Interleukin receptor TIR domain 33 175 IPR035897 -
Pvu7g1653 1280 SMART till_3 34 173 IPR000157 GO:0007165
Pvu7g1653 1280 Pfam NB-ARC domain 214 430 IPR002182 GO:0043531
Pvu7g1653 1280 PRINTS Disease resistance protein signature 233 248 - -
Pvu7g1653 1280 PRINTS Disease resistance protein signature 303 317 - -
Pvu7g1653 1280 PRINTS Disease resistance protein signature 397 411 - -
Pvu7g1653 1280 PRINTS Disease resistance protein signature 987 1003 - -
Pvu7g1653 1280 Gene3D - 203 357 IPR027417 -
Pvu7g1653 1280 MobiDBLite consensus disorder prediction 1266 1280 - -
Pvu7g1653 1280 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 821 1059 IPR044974 GO:0006952
Pvu7g1653 1280 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 710 IPR044974 GO:0006952
Pvu7g1653 1280 Pfam TIR domain 34 205 IPR000157 GO:0007165
Pvu7g1653 1280 Gene3D Ribonuclease Inhibitor 745 1064 IPR032675 -
Pvu7g1653 1280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 456 IPR027417 -
Pvu7g1653 1280 ProSiteProfiles TIR domain profile. 33 199 IPR000157 GO:0007165
Pvu7g1653 1280 Gene3D - 32 202 IPR035897 -
Pvu7g1653 1280 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 821 1059 - -
Pvu7g1653 1280 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 27 710 - -
Pvu7g1653 1280 MobiDBLite consensus disorder prediction 1250 1280 - -
Pvu7g1653 1280 Pfam C-JID domain 1082 1244 IPR045344 -
Pvu7g1653 1280 Gene3D Ribonuclease Inhibitor 530 743 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1653 Pvu-Chr7 38888639 38896153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1653 30 924 WRKY Transcription Factor Family AT4G12020 31.087 4.38e-98 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1653 - - pvu:PHAVU_002G323300g 1722.98