Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu7g1634 | ATGGTAGCTATTCTGAAGAGACAGAGAGAAGCGGAATCAGAAGAGATTAAGGATTTGGCCAAGAGTTTTTCGCCTCACGAGTTCCAGTGTAAGACGTGTAACCGCAAATTCTCGTCGTTCCAAGCGCTGGGAGGCCACCTGGCCAGCCACAAGAAGCCCAAGCTCGACGGAGAAGAGGCAAAGGATCTGAGTCTGGGCCGGAAGCCCAAAGCGCACGAGTGTTCGATTTGCGGGCAGGAATTCTCCTTGGGCCAGGCCCTGGGAGGGCACATGAGAAAACATAAGGGTAGCATGAACGGAGGGCTTTCTTCTTCTGTTATTCCCAAAGCACCGCTTCTGAAACGTTCCAATAGCAGCAAGAGGGTGATGTGCTTGGAGTTGGATCTCAACCTCACGCCGTTGGAAAATGACTTGAAGTTGTTGTTCGGAAACAAGGCTCCCACGGTGCATCTTTCGTTGTAG | 462 | 0.5173 | MVAILKRQREAESEEIKDLAKSFSPHEFQCKTCNRKFSSFQALGGHLASHKKPKLDGEEAKDLSLGRKPKAHECSICGQEFSLGQALGGHMRKHKGSMNGGLSSSVIPKAPLLKRSNSSKRVMCLELDLNLTPLENDLKLLFGNKAPTVHLSL* | 154 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu7g1634 | 153 | Gene3D | Classic Zinc Finger | 12 | 67 | - | - | |
Pvu7g1634 | 153 | Gene3D | Classic Zinc Finger | 68 | 123 | - | - | |
Pvu7g1634 | 153 | PANTHER | AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED | 12 | 147 | - | - | |
Pvu7g1634 | 153 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 72 | 99 | IPR013087 | - | |
Pvu7g1634 | 153 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 30 | 50 | IPR013087 | - | |
Pvu7g1634 | 153 | SMART | c2h2final6 | 72 | 94 | IPR013087 | - | |
Pvu7g1634 | 153 | SMART | c2h2final6 | 28 | 50 | IPR013087 | - | |
Pvu7g1634 | 153 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 12 | 147 | - | - | |
Pvu7g1634 | 153 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 74 | 94 | IPR013087 | - | |
Pvu7g1634 | 153 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 28 | 55 | IPR013087 | - | |
Pvu7g1634 | 153 | SUPERFAMILY | beta-beta-alpha zinc fingers | 28 | 94 | IPR036236 | - | |
Pvu7g1634 | 153 | Coils | Coil | 2 | 22 | - | - | |
Pvu7g1634 | 153 | Pfam | C2H2-type zinc finger | 71 | 95 | - | - | |
Pvu7g1634 | 153 | Pfam | C2H2-type zinc finger | 28 | 53 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu7g1634 | Pvu-Chr7 | 38551904 | 38552756 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu7g1634 | 20 | 143 | C2H2 Transcription Factor Family | AT2G37430 | 56.589 | 4.44e-43 | 139 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Pvu7g1634 | zf-C2H2_6 | 3.2e-09 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu7g1634 | - | - | vra:106771374 | 237.269 |