Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1633 ATGAAGAGACGCAGAGAAGAGAACGTGGATTTGGCAAATTGTCTAATACTACTCTCTCATCCCAGAGAAGTCAAACCCCAAAATCTTTTAGGCCCTGTGGAATATGAGTGCAGAACCTGCAACCGCAAGTTCTCTTCGTTTCAAGCCCTTGGTGGCCACAGGGCCAGCCACAAAACTCCCAAACAAGACCTAAAAGAAGAGGACAAAATTGTGAGATTGGAAAATAAGCCCAAAAGGCACGAGTGCTCCATTTGTGGTGAAGAATTCTCTCTGGGTCAGGCACTGGGAGGGCATATGAAAAGGCACAGAATTTCCCTAAACGAAGGGTTTTCTTCAATAAACCAGGTTGTGGTAAAAGTCCCGATTCTGAAAAGGTCGAATAGTAGGAAGGTTATTTGCTTGGATTTGAACTTGACCCCTCTGCAGAATGACTTGAAGTTATTGTTTGGCGACAAAGCACCCAAAGTTGATTCCTTCGTCTGA 483 0.4451 MKRRREENVDLANCLILLSHPREVKPQNLLGPVEYECRTCNRKFSSFQALGGHRASHKTPKQDLKEEDKIVRLENKPKRHECSICGEEFSLGQALGGHMKRHRISLNEGFSSINQVVVKVPILKRSNSRKVICLDLNLTPLQNDLKLLFGDKAPKVDSFV* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1633 160 ProSitePatterns Zinc finger C2H2 type domain signature. 82 102 IPR013087 -
Pvu7g1633 160 ProSitePatterns Zinc finger C2H2 type domain signature. 37 57 IPR013087 -
Pvu7g1633 160 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 62 IPR013087 -
Pvu7g1633 160 Pfam C2H2-type zinc finger 79 104 - -
Pvu7g1633 160 Pfam C2H2-type zinc finger 35 59 - -
Pvu7g1633 160 PANTHER ZINC FINGER PROTEIN ZAT5 2 155 - -
Pvu7g1633 160 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 2 155 - -
Pvu7g1633 160 Gene3D Classic Zinc Finger 32 102 - -
Pvu7g1633 160 SUPERFAMILY beta-beta-alpha zinc fingers 35 102 IPR036236 -
Pvu7g1633 160 ProSiteProfiles Zinc finger C2H2 type domain profile. 80 102 IPR013087 -
Pvu7g1633 160 SMART c2h2final6 80 102 IPR013087 -
Pvu7g1633 160 SMART c2h2final6 35 57 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1633 Pvu-Chr7 38538562 38539126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1633 1 157 C2H2 Transcription Factor Family AT2G37430 46.552 3.57e-46 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu7g1633 zf-C2H2_6 7.9e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1633 - - gmx:100793243 265.774