Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1623 ATGGGAGAAGAAGCGGTTTGTGTGCATGCATTAGATGAAGGAAGGAAGGAAAACAATGAGGAGTCAAGGACGGAACTGAAGCGTGACTATGACCAATGCGTTGGTGATACCGAACGTCACCTGTTTCCTCATAAGAAACAGGTGAAAGAAGTTTCGAACGATGAAGTGCGCTCTGAGGTTTCTAACCCCAACGTTTCTGCAGCAGAGCATGCGCTAACTTTTCAAGATATCAGTAGCCAACCAACTGAATCCACTGATGTTAACCATGCAGAGTGTGGGGAACTGACGTCTACTCTTTTGGAGAATTCAAGTTCTGATGAGACCTTGAGTGATGAAGCTGGTGATCAGAATATTACTACTACTACTACAAATAATAGTAATAATAACAACAATATTTCTCAGAGTGATAAGGACACGAGTAGTGCTGCAATGACATCCTGTGTTGTGATGGAAATCCCCAAGCATGCTAGTTCATCTGGGATCAGGAAGATTACTTTTAAGTTTAGTAAAAAGAAAGAGGACCATGGTTACCAACCACCTGCTCCTGTGCACCGTTCTGCTCTTTACGCTGATGGCAATCACATTGGTTTTCATGGGGTTGATGAATATTTGGCAAGGGACTATTGTAGTGGTGGGTCGGTAGAAAGCATGGGTTATGTTCATGATGGAGATTTGGACTCGTACGCTCACAATATGGAATTGAAAATGTCCAAGAAAGTAGTTCCCAACTGCTACCCTACAAATGTCAAAAAACTTTTATCAACTGGCATCCTTGACGGAGCTGTAGTGAAGTATATTTACAATCCTGGAAAGGTTGAACTACAGGGGATTATTGATGCTGGTGGATATTTGTGTGGCTGTACAATGTGCAATTACACTAGAATTCTTAGTGCCTATGAGTTTGAGCAGCACGCGGGAGCCAAGACTCGACATCCAAATAATCATATTTTCTTAGAAAATGGAAGACCGATATATAGTATTATACAGGAAATAAAAACTGCTCCACTCAGTATATTAGATGAGGTTATAAAGAATGTGGCTGGTTCCTCTGTCAATGAGGAGTCTTTCCAGGTTTGGAAAGAAAATATTCTACACAGCAACGGCAAGGTTCAGGCTTATAAAAACTGTAGCACCAAACATGTTGGCATGTCTCATACAAACATAAGTCAATCTGTAGATAGTACTAGCCACTTGTCGTCTTTGCACGTGCCAAGTCATCATGAGCAGCTCAAGTATATGAATCAGACAAATGACGAATGGAAACGTGTGATGAAAAAGTCAAGCTCCTACTCTTCTAATTCTGGTGTACTTCTGAAAAGAACTGCTGATGGTTGCACTAAGAGAAGGGACAATGATTTACACAGGTTACTTTTTATGCCAAATGGGCTACCAGATGGTGCTGAGTTGGCTTATTATGTCAAGGGACAGAAATTACTTGGAGGTTACAAACAAGGAAGCGGTATAGTCTGTGGTTGTTGTGATATTGAGATAAGCCCTTCACAGTTTGAAGCCCATGCTGGAATGGCTGCTAGGCGTCAACCTTATCGACACATATATACTTCCAATGGGTTAACACTTCATGATATAGCTCTCTCATTGGCAAATGGTCAAAACCTTACCACGGGAGACAGTGATGATATGTGTGCAGTATGTGGAGATGGAGGAGATTTGATTCTTTGTAATGGATGCCCTAGGGCCTTTCATACAGCCTGCTTGGGTTTACAGTGTGTTCCAGACAGTGGTTGGCGATGTCTAAATTGTGGAGATAACGCTGGTAATGGAAGAGAATCTTCTATAGTGAGGCCAATCATGATCCGGTTGACACGAGTTGATAAAACACCAGATTTTGAAATGGGTGGATGTGTTGTTTGCAGGGAGCATGATTTCAGTGTTGCAAAATTTGATGAACGAACAGTAATAATTTGTGACCAGTGTGAGAAGGAGTATCATGTTGGCTGCTTGCGGGACATTGGGCTATGTGAGTTGGAAGAGCTGCCCAAGGATAAGTGGTTTTGTTGCAGTGACTGCAATCGAATATATGTAGCTCTACAGAATTCAGTTACTGCTGGAGCAGACATTATACCAGCTTCCTTGTCAGAACTAATAATCAGGAAGCATGAGGAAAAGGGATTATGTTCCTATGGTTCTCAGGATGATATTCAGTGGAGAATTTTAAGTGGAAAAAGCCGTTATCCAGAACATTTACCCTTGCTTTCGCGAGCTGCTGCTATTTTCCGAGAGTGTTTTGATCCCATTGTTGCAATATCTGGCCGTGATCTGATTCCTGTTATGGTCTACGGGAGAAATATTTCTGGCCAAGAGTTTGGGGGGATGTATTGCATTGTTTTAATAGTGAATTCTGTTGTAGTATCTGCTGGGCTTCTGAGGATTTTTGGCCGTAATGTTGCTGAGCTTCCACTCGTTGCTACTAGCAGAGTACATCAAGGAAAAGGATATTTCCAAGTGTTGTTCTCTTGCATAGAGAGGTTGCTGTCTTCTCTAAACGTAGAGAAGCTGGTGCTTCCTGCAGCAGGGGATGCAGAGTCAATTTGGACTAAGAAATTGGGCTTCCGAAAGATGAGTGAAGATCAGTTATCCAAACATCTCAGAGAGGTGCAGCTAACTCTCTTCAATAAAACTTCAATGCTGGAGAAGACAGTGGAGCAGACTATAGAATGA 2679 0.4203 MGEEAVCVHALDEGRKENNEESRTELKRDYDQCVGDTERHLFPHKKQVKEVSNDEVRSEVSNPNVSAAEHALTFQDISSQPTESTDVNHAECGELTSTLLENSSSDETLSDEAGDQNITTTTTNNSNNNNNISQSDKDTSSAAMTSCVVMEIPKHASSSGIRKITFKFSKKKEDHGYQPPAPVHRSALYADGNHIGFHGVDEYLARDYCSGGSVESMGYVHDGDLDSYAHNMELKMSKKVVPNCYPTNVKKLLSTGILDGAVVKYIYNPGKVELQGIIDAGGYLCGCTMCNYTRILSAYEFEQHAGAKTRHPNNHIFLENGRPIYSIIQEIKTAPLSILDEVIKNVAGSSVNEESFQVWKENILHSNGKVQAYKNCSTKHVGMSHTNISQSVDSTSHLSSLHVPSHHEQLKYMNQTNDEWKRVMKKSSSYSSNSGVLLKRTADGCTKRRDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGSGIVCGCCDIEISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLANGQNLTTGDSDDMCAVCGDGGDLILCNGCPRAFHTACLGLQCVPDSGWRCLNCGDNAGNGRESSIVRPIMIRLTRVDKTPDFEMGGCVVCREHDFSVAKFDERTVIICDQCEKEYHVGCLRDIGLCELEELPKDKWFCCSDCNRIYVALQNSVTAGADIIPASLSELIIRKHEEKGLCSYGSQDDIQWRILSGKSRYPEHLPLLSRAAAIFRECFDPIVAISGRDLIPVMVYGRNISGQEFGGMYCIVLIVNSVVVSAGLLRIFGRNVAELPLVATSRVHQGKGYFQVLFSCIERLLSSLNVEKLVLPAAGDAESIWTKKLGFRKMSEDQLSKHLREVQLTLFNKTSMLEKTVEQTIE* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1623 892 ProSitePatterns Zinc finger PHD-type signature. 621 676 IPR019786 -
Pvu7g1623 892 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 2 889 - -
Pvu7g1623 892 ProSitePatterns Zinc finger PHD-type signature. 548 587 IPR019786 -
Pvu7g1623 892 SUPERFAMILY FYVE/PHD zinc finger 543 587 IPR011011 -
Pvu7g1623 892 ProSiteProfiles Zinc finger PHD-type profile. 545 590 IPR019787 -
Pvu7g1623 892 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 617 679 IPR013083 -
Pvu7g1623 892 MobiDBLite consensus disorder prediction 10 30 - -
Pvu7g1623 892 PANTHER AUTOIMMUNE REGULATOR 2 889 - -
Pvu7g1623 892 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 771 863 IPR016181 -
Pvu7g1623 892 CDD PHD1_AIRE 547 587 - -
Pvu7g1623 892 MobiDBLite consensus disorder prediction 101 139 - -
Pvu7g1623 892 Pfam Tify domain binding domain 276 330 IPR032308 -
Pvu7g1623 892 Pfam Tify domain binding domain 481 530 IPR032308 -
Pvu7g1623 892 SMART PHD_3 547 588 IPR001965 -
Pvu7g1623 892 SMART PHD_3 620 677 IPR001965 -
Pvu7g1623 892 Gene3D - 717 886 - -
Pvu7g1623 892 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 535 614 IPR013083 -
Pvu7g1623 892 SUPERFAMILY FYVE/PHD zinc finger 617 674 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1623 Pvu-Chr7 38399070 38409934 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1623 1 887 PHD Transcription Factor Family AT3G53680 51.885 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1623 - - vun:114190395 1688.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1623 7 38399070 38409934 Pvu7g1623 7 38399070 38409934 ECH