Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1617 ATGACTGAAACAGAGAGAACACTGCTAATGGCTATGGCTGATTCCACTCCGACTGCAACTCCTTCAAACGACACCGAATCATGCCTTTTCCATCCTACGGTCACCTTATACGATTGGTGGTTGATTAAAGCCAAAAACGACTTCAAAGGAAAGCGTTTAGCCGTCGCAGGCGTCTCATCGAGAAAGGATGTGGCAATGCGCGTGTTTGTTTCTGCTCCCATTATCAAAAGATACGACGAGTTTTCTCTCGAGACTGTGGATGGGAAATGCGTTATAATTAGTGGCTTAATCAACGAGCAGCGCACTATTGAAAACGGTTTCGGCCCCGAGGTTTTCAACCAATTTATATTTGGCTTCCCTCCAGACTGGGAAAGCTATGCTCTAGATTTCTCCCGAGAAGAATCAACCATTGACACTAATTTGAGTAGTGGTGGTGGGAAAAAACGTAGTGCCAGGTTGCATGATATTAAAGTATGCCACCTGAAGAAGCAGGCTGCTTCTGGAGGTATTTCGAAGCAACCAGATAACGAGGAGAACTCTACTTCAGTGGCCTTTGAGAATTGTGATGTAGAGGGATTGGGAAGTCCCGCAACACCCGTTCAGTCACAATCGAGTAGTGAATATTCAGTCGAAAAGATAGTTAAAAAATCTGCATCCAGAGTTTCTAGAACGTTGTCACCAATGACTGAAGGCTGTTATAAGAAAAAAGTTGGCAGGCCTAAGGGATCATGGAATCAATCTGCTTCTGCTGTGAAAAGTTCGCGATTAAAAGATCAAAGTAATTTGACCGAGGGAAGCCAACCGAAAATATCCACGGTTACGCCTGAGTCATCGAATTTCAGAACATCAGATAATGAGGTGCCACAATTTCAGAACATCGAATTGTCACCAGATAACGAGGATAACTCTACTTCAGTGGCCCTTGAGAATTGTGATGTAGAGGGATTGGGAAGTCCCGCAATACCCGTTCAGTCACAATCGAGGAGTGAATATTCAGTCGAAAAGATAGTTAAAAAATCTGCATCCAGAGTTTCTAGAACGTTGTCACCAATGACTGAAGGCTGTTTTAAGAAAAAAGTGGCCAGGCCTAAGGGATCACGGAATCAATCTGCTTCTGCTGTGAAAAAATCGCGATTAAAAGATCAAAGTAACATGACCGAGGGAAGCCAACCGAAAATATCCACTGTTACGCCCGAGTCATCGAATTTCAGAACATCCAGATCTGGCAGGATGCTTCTACCTCCCTTAGAATTTTGGCGCAATCAAATACCAATATATGATGCGGATCATGAGCTTAAAGAAATTAAGGATGGTGCATCTCTGATAGCACCTTGTAGGGTTTATTCACCATCATTGAGCAGGTTTAACACTCCAAAACGTGCAGCGGGACGTGGGAAAGGGAGTTAA 1407 0.4371 MTETERTLLMAMADSTPTATPSNDTESCLFHPTVTLYDWWLIKAKNDFKGKRLAVAGVSSRKDVAMRVFVSAPIIKRYDEFSLETVDGKCVIISGLINEQRTIENGFGPEVFNQFIFGFPPDWESYALDFSREESTIDTNLSSGGGKKRSARLHDIKVCHLKKQAASGGISKQPDNEENSTSVAFENCDVEGLGSPATPVQSQSSSEYSVEKIVKKSASRVSRTLSPMTEGCYKKKVGRPKGSWNQSASAVKSSRLKDQSNLTEGSQPKISTVTPESSNFRTSDNEVPQFQNIELSPDNEDNSTSVALENCDVEGLGSPAIPVQSQSRSEYSVEKIVKKSASRVSRTLSPMTEGCFKKKVARPKGSRNQSASAVKKSRLKDQSNMTEGSQPKISTVTPESSNFRTSRSGRMLLPPLEFWRNQIPIYDADHELKEIKDGASLIAPCRVYSPSLSRFNTPKRAAGRGKGS* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1617 468 MobiDBLite consensus disorder prediction 190 209 - -
Pvu7g1617 468 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 16 180 - -
Pvu7g1617 468 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 303 430 - -
Pvu7g1617 468 MobiDBLite consensus disorder prediction 365 407 - -
Pvu7g1617 468 MobiDBLite consensus disorder prediction 231 286 - -
Pvu7g1617 468 Pfam SANTA (SANT Associated) 34 126 IPR015216 -
Pvu7g1617 468 MobiDBLite consensus disorder prediction 242 286 - -
Pvu7g1617 468 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 303 430 - -
Pvu7g1617 468 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 16 180 - -
Pvu7g1617 468 MobiDBLite consensus disorder prediction 357 407 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu7g1617 SANTA 5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1617 - - pvu:PHAVU_007G157300g 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1617 7 38247049 38255364 Pvu7g1617 7 38247049 38255364 ECH