Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1616 ATGGCCGCCAAAGGTGAGGGTCCAGCCATTGGAATCGATCTCGGAACCACCTACTCATGCGTAGGTGTCTGGCAGCATGATCGTGTTGAGATCATCGCCAACGACCAAGGTAACAGAACGACGCCGTCTTATGTTGGATTCACCGACACCGAGCGTCTCATCGGTGATGCCGCTAAGAACCAGGTCGCCATGAACCCTATCAACACCGTTTTTGATGCCAAGAGATTGATTGGTCGTAGAGTCTCCGATGCTTCTGTTCAGAGTGATATGAAATTGTGGCCTTTTAAGGTTTTTGCTGGACCCGGTGATAAGCCAATGATTCAGGTTAGCTACAAGGGTGAAGATAAGCAGTTTTCCGCAGAAGAAATCTCTTCCATGGTACTTATGAAAATGCGTGAGATTGCTGAAGCTTATCTTGGCACTTCGATCAAGAATGCTGTTGTTACTGTCCCGGCCTACTTTAACGATTCTCAGCGTCAAGCTACCAAGGATGCTGGTGTTATTGCTGGTCTTAATGTCATGCGAATTATCAATGAGCCAACTGCTGCTGCTATTGCTTATGGTCTTGACAAGAAGGCTACCAGTGTCGGTGAGAAGAATGTCTTGATTTTTGATCTAGGGGGTGGTACCTTTGATGTCTCTTTACTAACCATTGAAGAGGGTATCTTTGAGGTGAAAGCCACAGCTGGGGACACTCATCTCGGAGGTGAGGATTTTGATAACAGGATGGTGAACCATTTTGTTCAAGAGTTCAAGAGAAAGAACAAGAAGGATATCAGTGGCAACCCAAGAGCACTTAGGAGGTTGAGGACTTCTTGTGAGAGGGCAAAGAGAACTCTATCGTCTACTGCACAAACCACCATTGAAATTGATTCTTTGTATGAAGGAATTGATTTCTATTCCACCATTACCCGTGCCAGGTTTGAAGAGCTGAATATGGATCTCTTCCGTAAGTGCATGGAACCTGTTGAGAAGTGTTTAAGAGATGCTAAGATGGACAAGAGGACTGTCCATGATGTTGTACTAGTTGGTGGCTCCACTAGAATTCCCAAGGTTCAACAACTTCTGCAGGATTTCTTTAATGGAAAGGAGCTCTGCAAGAGTATCAACCCAGATGAGGCTGTGGCATATGGTGCTGCTGTTCAAGCTGCTATCTTGAGTGGTGAGGGTAACGAGAAGGTCCAAGATCTTCTCTTGCTTGATGTCACCCCACTCTCTCTCGGGTTGGAAACTGCTGGTGGGGTTATGACAGTCTTGATCCCCAGGAACACTACCATCCCAACAAAGAAAGAACAGGTTTTCTCAACCTATTCTGACAACCAGCCAGGTGTTTTGATCCAGGTTTATGAAGGTGAGAGAACAAGGACCAGAGATAACAATTTGCTGGGCAAATTTGAACTTTCAGGCATTCCTCCTGCACCCAGGGGTGTTCCTCAAATCACAGTGTGCTTCGACATTGATGCCAATGGTATCTTGAATGTCTCTGCCGAAGACAAGACTACTGGCCAAAAGAACAAAATCACCATTACCAACGATAAGGGTAGATTGTCAAAGGAAGAAATTGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAGTCCGAAGATGAAGATCATAAGAAGAAGATCGAGGATGCTGTCGAGCAGACCATCCAGTGGCTAGACACCAACCAACTTGGAGAGGCAGATGAGTTTGAGGACAAAATGAAGGAATTGGAAAGCCTCTGCAACCCTATCATAGCCAAAATGTACCAGGGTGGTGCTGGTCCAGACATGGGCGGTGCAATGGACGATGATGTTCCTGCTGGTGGAAGTGGTGCTGGTCCAAAGATCGAGGAAGTAGACTAA 1845 0.4612 MAAKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRVSDASVQSDMKLWPFKVFAGPGDKPMIQVSYKGEDKQFSAEEISSMVLMKMREIAEAYLGTSIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKRTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEDHKKKIEDAVEQTIQWLDTNQLGEADEFEDKMKELESLCNPIIAKMYQGGAGPDMGGAMDDDVPAGGSGAGPKIEEVD* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1616 614 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 543 IPR029047 -
Pvu7g1616 614 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Pvu7g1616 614 Pfam Hsp70 protein 9 545 IPR013126 GO:0005524|GO:0140662
Pvu7g1616 614 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 539 594 - -
Pvu7g1616 614 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 543 - -
Pvu7g1616 614 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Pvu7g1616 614 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Pvu7g1616 614 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 383 514 IPR029047 -
Pvu7g1616 614 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Pvu7g1616 614 Gene3D - 10 382 - -
Pvu7g1616 614 Coils Coil 521 548 - -
Pvu7g1616 614 Gene3D - 192 366 - -
Pvu7g1616 614 Gene3D - 71 126 - -
Pvu7g1616 614 PRINTS 70kDa heat shock protein signature 8 21 - -
Pvu7g1616 614 PRINTS 70kDa heat shock protein signature 36 48 - -
Pvu7g1616 614 PRINTS 70kDa heat shock protein signature 58 66 - -
Pvu7g1616 614 PRINTS 70kDa heat shock protein signature 146 166 - -
Pvu7g1616 614 PRINTS 70kDa heat shock protein signature 209 219 - -
Pvu7g1616 614 PRINTS 70kDa heat shock protein signature 337 353 - -
Pvu7g1616 614 PRINTS 70kDa heat shock protein signature 369 389 - -
Pvu7g1616 614 PRINTS 70kDa heat shock protein signature 396 415 - -
Pvu7g1616 614 PRINTS 70kDa heat shock protein signature 477 493 - -
Pvu7g1616 614 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Pvu7g1616 614 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 521 590 IPR029048 -
Pvu7g1616 614 Gene3D - 541 585 IPR029048 -
Pvu7g1616 614 Gene3D - 516 540 IPR029048 -
Pvu7g1616 614 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Pvu7g1616 614 Gene3D Actin; Chain A, domain 4 235 318 - -
Pvu7g1616 614 MobiDBLite consensus disorder prediction 586 614 - -
Pvu7g1616 614 PANTHER HEAT SHOCK PROTEIN 70KDA 539 594 IPR013126 GO:0005524|GO:0140662
Pvu7g1616 614 PANTHER HEAT SHOCK PROTEIN 70KDA 1 543 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1616 Pvu-Chr7 38234985 38238072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1616 1 614 Calmodulin-binding Proteins AT3G12580 86.943 0.0 1138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1616 K03283 - gmx:100804917 1141.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1753 1 43167313 43170199 Pvu7g1616 7 38234985 38238072 ECH
Pvu7g1616 7 38234985 38238072 Pvu1g1753 1 43167313 43170199 ECH
Pvu7g1616 7 38234985 38238072 Pvu7g1616 7 38234985 38238072 ECH
Pvu8g0133 8 1145634 1148629 Pvu7g1616 7 38234985 38238072 ECH
Pvu7g1616 7 38234985 38238072 Pvu8g0133 8 1145634 1148629 ECH
Pvu1g1753 1 43167313 43170199 Pvu7g1616 7 38234985 38238072 PCT