Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1561 ATGGCGGTTCCAGGGAGGCGCAACGGCATGAACGACGACGAAGAGGACTTAGACGATAACGCCCTTTTCGAAGAAGAAGGTCTCGTCGAAGACTACACTGATACCCCTCCTCACCTCCGCGACCTCTCCGCCGCCGCGCAGGTCGGCGACGTCCACGCCCTCCGCCTCGCTCTAGATAACTTGACCGGTAGTATTGATGAGCCAGTGGAGGATGGGGATACTGCTCTTCATTTGACATGTTTATATGGCCATTTGGCTTGTGTTCAGCTGCTACTAGAAAGAGGAGCAAACATTGAGGCTAAGGACGAAGATGGTGCAATTCCTTTGCATGATGCTTGTGCTGGAGGATTTACTGAGATAGTCCAACAGCTACTAAACAGAGCAAATGACGCAGAACATATAAAGAGAATGCTGGAATCAGTTGATTCTGAGGGTGATACTCCTCTCCATCATGCAGCAAGAGGTGAGCATGTTGATGTAACTAGGTTGTTGCTGTCTAATGGGGCATCTTCCACAAAGGAAAACTTATACGGAAAGACCCCGGCAGATTTACCTGATCAGAGCTCAGATGCTTGGAGTTTGCTTCACGCTGCCGCCCTTGCCATGTCATGCTAA 615 0.5008 MAVPGRRNGMNDDEEDLDDNALFEEEGLVEDYTDTPPHLRDLSAAAQVGDVHALRLALDNLTGSIDEPVEDGDTALHLTCLYGHLACVQLLLERGANIEAKDEDGAIPLHDACAGGFTEIVQQLLNRANDAEHIKRMLESVDSEGDTPLHHAARGEHVDVTRLLLSNGASSTKENLYGKTPADLPDQSSDAWSLLHAAALAMSC* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1561 204 Gene3D - 15 105 IPR036770 -
Pvu7g1561 204 Pfam Ankyrin repeats (3 copies) 104 172 IPR002110 GO:0005515
Pvu7g1561 204 SMART ANK_2a 104 133 IPR002110 GO:0005515
Pvu7g1561 204 SMART ANK_2a 144 173 IPR002110 GO:0005515
Pvu7g1561 204 SMART ANK_2a 71 100 IPR002110 GO:0005515
Pvu7g1561 204 ProSiteProfiles Ankyrin repeat profile. 104 136 IPR002110 GO:0005515
Pvu7g1561 204 ProSiteProfiles Ankyrin repeat region circular profile. 144 170 - -
Pvu7g1561 204 SUPERFAMILY Ankyrin repeat 42 184 IPR036770 -
Pvu7g1561 204 ProSiteProfiles Ankyrin repeat profile. 144 176 IPR002110 GO:0005515
Pvu7g1561 204 PANTHER SOWAH (DROSOPHILA) HOMOLOG 1 198 - -
Pvu7g1561 204 ProSiteProfiles Ankyrin repeat region circular profile. 71 103 - -
Pvu7g1561 204 Gene3D - 106 197 IPR036770 -
Pvu7g1561 204 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515
Pvu7g1561 204 ProSiteProfiles Ankyrin repeat region circular profile. 104 130 - -
Pvu7g1561 204 Pfam Ankyrin repeat 71 102 IPR002110 GO:0005515
Pvu7g1561 204 PANTHER TANKYRASE-LIKE 1 198 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1561 64 190 Ion Channels AT2G25600 29.801 1.28e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1561 - - gmx:100527544 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1561 7 37358356 37360839 Pvu7g1561 7 37358356 37360839 ECH